Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00964 ATGGCACAGCTTAGTTTGCGTAATTGTGGTAGTGGCGGCAGAAGCTCCTTGTCTCAAGTTTTAATTGTCTTTGCACTTGTGTTAGAGATCATTTGCTCTTTTCAGCTTTCAACATCTCACTCCATAGTGCAATCCCTTCCTGGATTCCAAGGACCCCTTCCTTTTGTTCTTGAAACTGGGTATGTGGGTGTAGGTGAAACTGAAGAGGAGCAAGATGGTGAAGTCTTCTACTATTTCATTCACTCAGAGAACAACCCCAAAGAGGACCCTCTCCTTCTTTGGCTTACCGGTGGCCCTGGTTGCTCTGCTTTGTCTGGCCTTGTCTTTGAAGTAGGTCCTTTATCATTTATAAACGAGGAATACAATGGGAGCTTGCCAAATCTGGTTTTGAAGCCACAGTCATGGACAAAGGTAAGCAGTGTTATATTCGTAGATTTACCTGTGGGTGCTGGATTCTCTTATGCCAAAACAGAACGTGCTGTTCACCAAAGTACCCGGAAAGTAGTTCAAGATGCTCATCAATTTATTAGGAAGTGGCTGGTTGATCATCCGGAATTTCAATCAAATGAAGTGTACATTGCGGGTGATTCAGTGTCTGGGCTTCCCATTCCAGCAATTGTTGAAGAAATTTCAAATGGAAATGAAGGTGGCGTCAAGCCACATATAAATCTCCAGGGGTACCTGCTGGGGAATCCCTTTACAACATTTATCGAAGATAATTATGCAGTAGCATTCAATCATGGCATGGGACTCATTTCTGATGAATTATACGAGTCACTAAATAGGAACTGTAAAGGAGAGTTCATTAATGTAAACCCCGGAAACAAAGCTTGTGTAAGAGACATGGAATCATACAAGGAGACTATTTCAGGAATTTATGTATGCCACATTTTGGAGCCTAACTGCGAGTTCGCCTTGCGTAACCCATGGAGGAGGAGATCTCTGACTCTAACTGATCAGCTCCACAAGTTTCCGATCCTTGCAGTCCCACCCTTAAGCTGTCGGAGTCATGCATATTTACTATGTACCTATTGGGCCAATTTTGAAGATGTTCGCAAGGCACTAAACGTTCGAAAGGGTAGTATAGGAAAATGGCAGCGCTGTAACTATGACATACTTTACGAGCATGATATTCGAAACAGCGTCCAATATCATGAAAATCTAAGCAGTAAAGGCTATCGTTCATTAATATACAGTGGGGATCATGACATGATAGTTCCATTCTTGGCGACCCAAGCGTGGATTCGATCTTTAAACTACACCATCGTGGATGAGTGGAGGCAATGGTACGTCAATGGTCAAGTTGCAGGATATACTAGGACTTATTCAAATCGGATGACGTTTGCAACTGTGAAAGGTGGAGGACATACAGCTACCGAGTACAAACCTGAAGAATGTTTAGGCATGTTCATTAGGTGGATATCTAAAAGGCCATTATAG 1440 0.4271 MAQLSLRNCGSGGRSSLSQVLIVFALVLEIICSFQLSTSHSIVQSLPGFQGPLPFVLETGYVGVGETEEEQDGEVFYYFIHSENNPKEDPLLLWLTGGPGCSALSGLVFEVGPLSFINEEYNGSLPNLVLKPQSWTKVSSVIFVDLPVGAGFSYAKTERAVHQSTRKVVQDAHQFIRKWLVDHPEFQSNEVYIAGDSVSGLPIPAIVEEISNGNEGGVKPHINLQGYLLGNPFTTFIEDNYAVAFNHGMGLISDELYESLNRNCKGEFINVNPGNKACVRDMESYKETISGIYVCHILEPNCEFALRNPWRRRSLTLTDQLHKFPILAVPPLSCRSHAYLLCTYWANFEDVRKALNVRKGSIGKWQRCNYDILYEHDIRNSVQYHENLSSKGYRSLIYSGDHDMIVPFLATQAWIRSLNYTIVDEWRQWYVNGQVAGYTRTYSNRMTFATVKGGGHTATEYKPEECLGMFIRWISKRPL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00964 479 Gene3D alpha/beta hydrolase 37 309 IPR029058 -
Adu08g00964 479 Gene3D - 333 479 - -
Adu08g00964 479 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 23 478 - -
Adu08g00964 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Adu08g00964 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Adu08g00964 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 204 IPR001563 GO:0004185|GO:0006508
Adu08g00964 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Adu08g00964 479 Pfam Serine carboxypeptidase 47 475 IPR001563 GO:0004185|GO:0006508
Adu08g00964 479 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 23 478 IPR001563 GO:0004185|GO:0006508
Adu08g00964 479 SUPERFAMILY alpha/beta-Hydrolases 43 478 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00964 Adu-Chr8 17476022 17480832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00964 37 66 Calmodulin-binding Proteins AT2G22960 63.333 3.90e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00964 K16296 - gmx:100792006 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00964 08 17476022 17480832 Adu08g00964 08 17476022 17480832 ECH