Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00949 ATGCAGAGATTGCCAGTGCCCTTCTCCAACGGTGTACGGGATAACATGAGCAACCCCGTCGAGGTAATCACAACAAACGGTCAGTCGTGGAGCATCTCGTGGGTTGTGGAGGAGGAGCATCCGCATCAAATCGTATTTACCGGAGGCTGGCGAGCCTTTTACGAACACTACCACCTTCGAATCGGTGACTCAATGCTGCTATCGTATCACCAACCGAAGTTTTTCTATGTGGCCATCCACGACACAAGATACTGCGAGATCAACTACGGAAGAAACTTGAGAAACGGAAGTCTTCCGGTAATACCCGCACATGGCAACTATACAGTCCAGTTCTTCGCGATAATCCCGGTTAACGACCCTGATACACTGAAGCTCCCGCTGCGGTTCTCCCGGGAATATGGCCGGTCCCTACCGCGACCACTGACCCTAACCACGCCTACAGGACATCGTCATCGCGTGGGCTGGAATATGCAACCTAATGGGAGGATCGTGCTTCATGGAGGATGGGACGATGTCCGGGCACGCTATGGCCTAAGGGATGAGTGGCTTGTGCTGTTCCGTTATCACACCGTTCAGAGCACAATGTACGTCATGTTCTTCAACGGTCATACTAGGGAAATCAACTACTTGGACCATGCGGGCCCGAGGACGGACTGCACTTGTATAACCAATCCGTCGGCCCCCAGGTCAAGGCACATAGCCGATGGGTACAGATCGACCAATCCGTTCTTTGTAAGTCCAATCATGCACCGCCTGGCAAACCGTTTTCTCCCGAATGTCCCCCCTCTGCCGGGAGTATGCAAGGATAGCCCAATTACGATTACCAACGAGAGGGGCGCGTGGACCGTTCGGTATACGCACTATGTCGGGAGGACGAACGGATGCTTTGGAATTGGCTGGTCTGCCTTAGCAACTGCATGCCAACTAAGACACGGCCATGTTTGTGTCTTCGAACGGCTGGCGCTGCAAGAATACCGGCTGCATATATATTGA 993 0.5307 MQRLPVPFSNGVRDNMSNPVEVITTNGQSWSISWVVEEEHPHQIVFTGGWRAFYEHYHLRIGDSMLLSYHQPKFFYVAIHDTRYCEINYGRNLRNGSLPVIPAHGNYTVQFFAIIPVNDPDTLKLPLRFSREYGRSLPRPLTLTTPTGHRHRVGWNMQPNGRIVLHGGWDDVRARYGLRDEWLVLFRYHTVQSTMYVMFFNGHTREINYLDHAGPRTDCTCITNPSAPRSRHIADGYRSTNPFFVSPIMHRLANRFLPNVPPLPGVCKDSPITITNERGAWTVRYTHYVGRTNGCFGIGWSALATACQLRHGHVCVFERLALQEYRLHIY 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00949 330 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 105 210 - -
Adu08g00949 330 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 3 90 - -
Adu08g00949 330 CDD B3_DNA 3 81 IPR003340 GO:0003677
Adu08g00949 330 ProSiteProfiles B3 DNA-binding domain profile. 108 203 IPR003340 GO:0003677
Adu08g00949 330 Gene3D - 1 85 IPR015300 -
Adu08g00949 330 Gene3D - 106 203 IPR015300 -
Adu08g00949 330 SUPERFAMILY DNA-binding pseudobarrel domain 240 330 IPR015300 -
Adu08g00949 330 SMART B3_2 1 83 IPR003340 GO:0003677
Adu08g00949 330 SMART B3_2 111 203 IPR003340 GO:0003677
Adu08g00949 330 PANTHER B3 DOMAIN-CONTAINING 105 210 - -
Adu08g00949 330 PANTHER B3 DOMAIN-CONTAINING 3 90 - -
Adu08g00949 330 SUPERFAMILY DNA-binding pseudobarrel domain 3 89 IPR015300 -
Adu08g00949 330 SUPERFAMILY DNA-binding pseudobarrel domain 111 204 IPR015300 -
Adu08g00949 330 ProSiteProfiles B3 DNA-binding domain profile. 1 83 IPR003340 GO:0003677
Adu08g00949 330 CDD B3_DNA 121 201 IPR003340 GO:0003677
Adu08g00949 330 Gene3D - 223 330 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00949 Adu-Chr8 17308694 17309962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00949 3 89 B3 DNA Binding Superfamily AT3G18990 28.736 1.78e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00949 - - ahf:112746889 625.935