Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00948 ATGGCTTCGCCATCTCCATCAATGGAAAGAAGGGTTGCTGGGGATGAAGATACCACTGGGGGCAAAGCAAACCATGGAGTTGGATCGGTTGAGGGCGAAGGCTTTGCAGGGTTGGAGTCGGACGAGTATGATTTACAGGAAGATGAAACAGAAAACGACCATCCAGTTGAGGGCGAACGCTCTGCAGGGATGGAGTCGGACGAGAATGACTTTCAGGAAGACGATACAGAACACGACCGTCATGCAGAGGCCGATGTCGACAATGGGGATGCGGTTGAATTGGAAGACGCTTTGGACGGCGCCAGAGGAATGTCTGAGAATTATGCGGAAGACGAGTTTTACGCCGTTGATTCCGGTAAGTCCATAGGTTGGATTGATTTTTTGAACTTGAGCACGGAGGATGTTCTCCGGTTTAATTTCGCAGATGTTGACATTGCATTTGAGTTCTATCAGCAATATGCAAAGCACCATGGATTCGGCGCGAGACGTTCCAGAAGCGAAAAACTCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTTCCGATCCCCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGTTACTCCGCATGGACGATGAATCAGGATGTTGGCACGTTGCGTTCTTTTCAGACGCGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCAGGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCGAATCCACGGTTTTATGGCGAGCCTGGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGGACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCTAGATGCGGAATCGTGCTTGAGGTATCTCCGAGAGTGCAAGGCAAATGATCCAGCACTGTACTACAAGGAAGTCGTTGACGGTGAGGGCGTGTTGCAACacttgttttgCTACACTGAGTTTTTACGTCATTTCCATCGATGCTTGATGTTCGTCCGCGCAAAGGAGGTGGAGGCTAATTTCGAGTGCACAAAGGGTGACCCTGTTATGACCACCAACCTGAAACAGCTGGAGCGGAGTGCAGCCGACAACTACACTCGTGCGATATTCTATTTGTTTGTTCCCATTCTTGACAGGGCCTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATTCACACCGTCTCTCGATACGGCACTCCGGGGAAGGAGTGGCGTGTTGTTGCAACGTCTGATACGAGGGAGGTCCGATGCACGTGCATGAGAATGGAATGTTTCGGGGTCCCCTACGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCCCGAGGTCTCTGATATTACCGAGATGGACCAAGGATGCAAAACTTGTGGCGGTGGAGTCGATGGGCGTGATTTGGGATTCTGTACAACTGACGCAACACTGGTGCCTGATGGATTGGTACCGGAAAGTGTGCAAGATTGCATGTCACAGCACCAAAAAGTTCCAGTTTGCAAGAGACATAGCCGTGCTGATGCTGAAGCACTTCGAGAACGAAGATGCAGGGAACACCAGTTTTCCACACGAGGGGCCACCTACTGAGGGTGGCAGACCCCCGGCGCGAAATCCACCCAGGCGCAATACAAAGGGTAACAGTGCTCATGGTGGAAAGAAGACCCAGCGATGTCGTTTGTGCTGGGAGGTGGGACACAACAGGACGACGTGTTCGGAGCGTCGCACAATGGAACCATCCAGCTCAGTTGCAGAAGACATAGATTCGATGGACACTGACATGGTCTATGATAACCTATCCGGCGATCTGTATGCGACCGCGGAGATTCCTTCGTTCCAATGCTCCGATAGTGACACGCAGGCTGGGTTTGCTAACAGCAACTTTGCTGGGACCAAGACGTCCGGGCCAGTCATGTCTCTCGCCGATTGA 2019 0.5181 MASPSPSMERRVAGDEDTTGGKANHGVGSVEGEGFAGLESDEYDLQEDETENDHPVEGERSAGMESDENDFQEDDTEHDRHAEADVDNGDAVELEDALDGARGMSENYAEDEFYAVDSGKSIGWIDFLNLSTEDVLRFNFADVDIAFEFYQQYAKHHGFGARRSRSEKLGEVRIRQEFVCHRQGFRSPKFYSMPNRQKRPRAETRCGCPARMLLRMDDESGCWHVAFFSDAHNHHVLELRFSSMLPGHRRMSEADIEQMNDMRKGGIGVSRIHGFMASLAGGYHNVPYTTRDMDNVNAKQRREGGLDAESCLRYLRECKANDPALYYKEVVDGEGVLQHLFCYTEFLRHFHRCLMFVRAKEVEANFECTKGDPVMTTNLKQLERSAADNYTRAIFYLFVPILDRACAMRVVDSEDNGSYFIHTVSRYGTPGKEWRVVATSDTREVRCTCMRMECFGVPYEHIIAVLVLNNVHEIPRSLILPRWTKDAKLVAVESMGVIWDSVQLTQHWCLMDWYRKVCKIACHSTKKFQFARDIAVLMLKHFENEDAGNTSFPHEGPPTEGGRPPARNPPRRNTKGNSAHGGKKTQRCRLCWEVGHNRTTCSERRTMEPSSSVAEDIDSMDTDMVYDNLSGDLYATAEIPSFQCSDSDTQAGFANSNFAGTKTSGPVMSLAD 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00948 672 MobiDBLite consensus disorder prediction 547 583 - -
Adu08g00948 672 ProSiteProfiles Zinc finger SWIM-type profile. 434 470 IPR007527 GO:0008270
Adu08g00948 672 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 138 341 IPR031052 GO:0006355
Adu08g00948 672 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 344 540 IPR031052 GO:0006355
Adu08g00948 672 MobiDBLite consensus disorder prediction 1 90 - -
Adu08g00948 672 MobiDBLite consensus disorder prediction 53 67 - -
Adu08g00948 672 Pfam FAR1 DNA-binding domain 148 237 IPR004330 -
Adu08g00948 672 MobiDBLite consensus disorder prediction 37 52 - -
Adu08g00948 672 MobiDBLite consensus disorder prediction 74 88 - -
Adu08g00948 672 PANTHER OS03G0181600 PROTEIN 344 540 - -
Adu08g00948 672 PANTHER OS03G0181600 PROTEIN 138 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00948 Adu-Chr8 17304835 17307679 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu08g00948 FAR1 4.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00948 - - adu:107480712 783.482