Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00946 ATGACCTTCCAAGACCACGAGCTGGTTCAGTTCATGCTGACCGAAACCGAAATACAGGACCTGTTTTCCCTCATTAACCACCATCCGGGCAGCCCCCCTAGTAGCTCCGGCTCGCAGGGGTCGAACCGGTCGGTTTACTCGAGCGAGGAAAGAAAGCTGAGGCGCATGCAGTCAAACCGGGAATCGGCCCGAAGGTCCCGCGGCAGGAAAAAAAAGCACATGGAGAATCTGACGGTCCAATTGAACCGGTTGAGACTCGAAAATCGAGAACTGAAGAACCAGCTACTCGTGACCATGCACCAGCATCTTCTACTCTCCCTTGAGAATGAGAAGCTATGTTCCGAATCCATTGCACTTAGCGCCACACTTTCCGATCTTTGCCAGATTTTGCGCACCATTCTTCCACAATAA 411 0.5207 MTFQDHELVQFMLTETEIQDLFSLINHHPGSPPSSSGSQGSNRSVYSSEERKLRRMQSNRESARRSRGRKKKHMENLTVQLNRLRLENRELKNQLLVTMHQHLLLSLENEKLCSESIALSATLSDLCQILRTILPQ 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00946 136 Pfam Basic region leucine zipper 48 95 IPR004827 GO:0003700|GO:0006355
Adu08g00946 136 CDD bZIP_plant_GBF1 52 102 IPR045314 GO:0003700|GO:0006355
Adu08g00946 136 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 54 69 IPR004827 GO:0003700|GO:0006355
Adu08g00946 136 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 49 95 IPR004827 GO:0003700|GO:0006355
Adu08g00946 136 PANTHER BZIP TRANSCRIPTION FACTOR 44 24 134 - -
Adu08g00946 136 MobiDBLite consensus disorder prediction 47 63 - -
Adu08g00946 136 SMART brlzneu 47 111 IPR004827 GO:0003700|GO:0006355
Adu08g00946 136 MobiDBLite consensus disorder prediction 24 75 - -
Adu08g00946 136 Gene3D - 49 104 - -
Adu08g00946 136 Coils Coil 74 101 - -
Adu08g00946 136 SUPERFAMILY Leucine zipper domain 51 103 IPR046347 GO:0003700|GO:0006355
Adu08g00946 136 MobiDBLite consensus disorder prediction 28 46 - -
Adu08g00946 136 Coils Coil 46 66 - -
Adu08g00946 136 PANTHER BZIP TRANSCRIPTION FACTOR 24 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00946 Adu-Chr8 17288565 17288975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00946 13 130 bZIP Transcription Factor Family AT3G49760 36.800 9.65e-19 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Adu08g00946 bZIP_2 1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00946 - - gmx:102661984 159.073