Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00942 ATGGGAAGAGATCCGGATGCCCAAGAACCTCAGGCCCAAGGACAACAACAAGACCAGGTGCAAGCACAACCACAGACACCCCCACCACCACCCCCTCCTTCGCCAACAATGCAAGATTTGATGGATGAATTGCGAAGCATGAGAGTATATATGGAGGAGCAATTTGCTGATATGAGGCAGCGTCAACGTATATTTACGGACACTGAGATGAATGAGCAATACCAGGAGGACGATGACTTTAACCAACAAGAAGAGCTAGTAAGTGACCAAGATATGATGGATGAACAGACTGAATTCGAACAAGATTTCAGAGATGAATTTTCCGAGGGAGCATTTTTTTCTGAATCTGATATGTTAGATTATATCGTTGAAGCCGCTTATGCGGTTGACTCCGTGCAAGACATCACATCTTTGAAATTTAGTGAGAACTTTGCGGATGAAATTGGCAAATACCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATATGAAGTATTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTAGTGGCGAGATTTACAGACAAATGTTTGTCTGTCACAGGCAAGGATTCAGGATGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAATTGGAAGTCAGAGATCAGCACCTCAGATATTTAGTCTTCTAGCTAGTCAAGCAGGCGGGTACGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGAGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTCACGATTCAAGAGGAGACTACGAGATTCCCGTGTTTAAGCGTAAGTGGGTTCAGCTTATTGAAGAATTTGGCATTGAGGATAAGCCATGGGTGATCAACATGTAA 1008 0.4276 MGRDPDAQEPQAQGQQQDQVQAQPQTPPPPPPPSPTMQDLMDELRSMRVYMEEQFADMRQRQRIFTDTEMNEQYQEDDDFNQQEELVSDQDMMDEQTEFEQDFRDEFSEGAFFSESDMLDYIVEAAYAVDSVQDITSLKFSENFADEIGKYHFSTLQLAFDFYMKYSKSKGFSARKSKTFKNSSGEIYRQMFVCHRQGFRMEKYYTMEKRKKEPRLETRTGCEARMDVKFVPEIGSQRSAPQIFSLLASQAGGYEFVGYGPRDMYNEIARQRRQIPGDAARVLKKLEDMRLKDPQLYFKACHDSRGDYEIPVFKRKWVQLIEEFGIEDKPWVINM 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00942 335 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 75 229 - -
Adu08g00942 335 MobiDBLite consensus disorder prediction 23 37 - -
Adu08g00942 335 Pfam FAR1 DNA-binding domain 161 229 IPR004330 -
Adu08g00942 335 MobiDBLite consensus disorder prediction 1 42 - -
Adu08g00942 335 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 75 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00942 Adu-Chr8 17209094 17213120 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu08g00942 FAR1 1.1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00942 - - ahf:112720852 434.876