Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00918 ATGGGTATCTGCATATCCGCTGAATCTTCAGAGATTCATCACGAATCATCTAACTTAGCTACTGAAGAGAATGTAACAGTGTATGAATCTAGCAAGAATGTTAATTTAAGTAAGATTCACAGACTTTCTTCTATTCACTCTAAAAAGGGTAGCAAAGGACTTAACCAAGATGCTGCCACTCTTTGCCAGGGTTATGGCATGGAGGATGCAGCATTTTGCGGTGTTTTTGATGGGCACGGAAGGAATGGTCGCATAGTGAGCCAAATAGTAAACAAGCGTTTGTCTTCACTCATTCTGGACCAAAAGAATATGATAACTCATGCCAAGAATGATAACAATACCATATTGGAAGATGATGACTCGTGCACAAACAAGAATTTTCAAGAGTGGAAAGAAGCTATTCTTTGTGCTTTCAGGGTGATGGACATGGAGGTGAATCAACTAGAGAATCTAGATTTCTCTTGCAGTGGAACTACAGCTATAGTTGCTATAAGACAGAGTGAAGATCTTATCATGGCTAACCTTGGTGACTCAAGAGCTGTCTTGGGGACAATTTGTGATGGTGAAATCATTCCCATTCAACTGACCACAGATATGAAGCCTGGATTACCTCGTGAAGCAGATAGAATAAGAAGTTGTAATGGTCGTGTATTTGCTCTACATGAGGAACCACACATCCAAAGAGTATGGTTACCCAATGAGAACTCCCCAGGCCTAGCAATGTCTCGTGCTTTTGGAGATTTCATTCTTAAGGACCACGGTATCATTGCTATTCCGGAGATTTCGTTTCGCCCTCTAACATCAAGTGACCAATTTGTTGTGCTTGCAAGTGATGGGGTGTGGGATGTGCTAAGCAACATCGAGGTTTGCTCGATCGTGTGGACGACAGAGAATGAAGCAGCGGCAGCTAAGGCAGTGGTGGAAGCAGCTACAGCTGCATGGAAAAGCAAATATCCTTCCTCCAAGGTAGACGACTGCACCGCAGTTTGCCTCTTCCTGCAGAAGAAACAAAGGAGCCTAGTATATGTAAAAACTGGAAATAATGTTAACTAA 1053 0.4245 MGICISAESSEIHHESSNLATEENVTVYESSKNVNLSKIHRLSSIHSKKGSKGLNQDAATLCQGYGMEDAAFCGVFDGHGRNGRIVSQIVNKRLSSLILDQKNMITHAKNDNNTILEDDDSCTNKNFQEWKEAILCAFRVMDMEVNQLENLDFSCSGTTAIVAIRQSEDLIMANLGDSRAVLGTICDGEIIPIQLTTDMKPGLPREADRIRSCNGRVFALHEEPHIQRVWLPNENSPGLAMSRAFGDFILKDHGIIAIPEISFRPLTSSDQFVVLASDGVWDVLSNIEVCSIVWTTENEAAAAKAVVEAATAAWKSKYPSSKVDDCTAVCLFLQKKQRSLVYVKTGNNVN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00918 350 Pfam Protein phosphatase 2C 64 311 IPR001932 -
Adu08g00918 350 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 338 - -
Adu08g00918 350 Gene3D - 24 337 IPR036457 -
Adu08g00918 350 ProSiteProfiles PPM-type phosphatase domain profile. 42 333 IPR001932 -
Adu08g00918 350 CDD PP2Cc 41 298 IPR001932 -
Adu08g00918 350 SUPERFAMILY PP2C-like 35 334 IPR036457 -
Adu08g00918 350 SMART PP2C_4 32 331 IPR001932 -
Adu08g00918 350 PANTHER ALPHABET, ISOFORM E-RELATED 1 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00918 Adu-Chr8 16746151 16748005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00918 1 338 PP2C-type Phosphatase Gene Family AT5G26010 51.906 2.21e-107 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00918 - - gmx:100795893 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00918 08 16746151 16748005 Adu08g00918 08 16746151 16748005 ECH
Adu06g03036 06 108398883 108401713 Adu08g00918 08 16746151 16748005 PCT