Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00913 ATGGCAAGGAAATGCACGTATTGTGGGAATTCTGGTCACAATTCAAGGACTTGCAACCACAGTTTCAGTAGTACCACAGGGGGGTGTAGTGGACTAAAGCTCTTTGGGGTACAACTTGATGATAATCAATATTATTCTTCTTCTTCATGCATGGACTACCTGCTATCCTTATCTGCTGCTGCTTCTTTATCATCGTCGCTTGTAGGTGCAAATAAAAATTCACATGAAATATCTTATTCTTACTTAACCTCCGGTGCCAGCAGTAGTGGTCTTATGTCAACGATCAAAGACAATAACAAAGGATTGGCATGGAGTGAGGAGGAGCACCGTATATTCCTAGAGGGGATGGAGAAGCTGGGGAAGGGTAACTGGAGAGGCATATCCAGATGTTTTGTGAGAACCAGAACACCCACTCAAGTGGCCAGCCATGCACAAAAGTATTTTCTCCGTCAGACTCGCCGGCGGAACACTTTCAGATCAAGAAAACACCGCCTCACCCTAGCAAATGAGGGCACTAGGAATAGCGATGCCGTTGTTCTATCTCACTGGCTTGCCTCTGCAACTTCAACAAATTGCACCTCAATTCAAGGCGCAGCAGCTCCTGATTTAGAATTGAAACTTGCAACTCCCTCTCCCTCCCTCTAA 645 0.4558 MARKCTYCGNSGHNSRTCNHSFSSTTGGCSGLKLFGVQLDDNQYYSSSSCMDYLLSLSAAASLSSSLVGANKNSHEISYSYLTSGASSSGLMSTIKDNNKGLAWSEEEHRIFLEGMEKLGKGNWRGISRCFVRTRTPTQVASHAQKYFLRQTRRRNTFRSRKHRLTLANEGTRNSDAVVLSHWLASATSTNCTSIQGAAAPDLELKLATPSPSL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00913 214 Gene3D - 104 154 - -
Adu08g00913 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 152 IPR017930 -
Adu08g00913 214 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Adu08g00913 214 SMART sant 100 150 IPR001005 -
Adu08g00913 214 Pfam Myb-like DNA-binding domain 103 148 IPR001005 -
Adu08g00913 214 CDD SANT 103 148 IPR001005 -
Adu08g00913 214 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 164 - -
Adu08g00913 214 ProSiteProfiles SANT domain profile. 104 152 IPR017884 -
Adu08g00913 214 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 99 151 IPR006447 GO:0003677
Adu08g00913 214 SUPERFAMILY Homeodomain-like 99 153 IPR009057 -
Adu08g00913 214 ProSiteProfiles Myb-like domain profile. 96 148 IPR001005 -
Adu08g00913 214 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Adu08g00913 214 PANTHER TRANSCRIPTION FACTOR KUA1 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00913 Adu-Chr8 16700247 16701252 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu08g00913 Myb_DNA-binding 1.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00913 - - aprc:113866246 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00913 08 16700247 16701252 Adu08g00913 08 16700247 16701252 ECH