LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu08g00889	ATGTCACCTGATAAGGTTACTCATTCACCAACCGCTTACAGCAGTTGGCATTCCTCTAACCTAATCCTCTCCTTCTTCTCTTCTCTGTCGTCGTCGTCACAGGTGCCACCGGTGGCGGTAGCGGCAAGAGGAGTTGTCCCTAGACATCACGTTAATAAAAGAATGTCTTCCACGTTCTATGATGGTAAAACACCCTTAGCACCAAACACGACGTTGGTGGCCGTGGACAAAGATAAGAACAGTTCCTACGCATTTCGTTGGGCGGTTAATCATCTCGACAACCCTCTCGTCCTTGCCGTCCATGTCAAACACAAAGACAACATTTGTAGCCTTCGTAACGATCTCGTTACTGTTTATGAACCCGATGAAGACGATGTAGCCAATGTGTTCGGCAACTTACGTGGACTTTGTAATCGAAAAGCTGTGCAAGTAAAAGAAGCCGTAATCCATGAAAGCGATGTTGTGAGAGGAATTGTGGAATTTGCAAGCAAGAATTTCATACACACTATTGTGGTTGGTGCACCAGCCAACAAGGGTGCTTTGTCAAGAATATTGAGAGGGCACCAAACTGATGTGCCAACAGCATTGCTTAAATCAGCTCCAAATTTCAGTTCTGTATACGTGATTTCCAAATGGAAAATTGTTTCGGTTCGATCTGCAACACGTGCCATCCAACATGCCCTTGCCCCACCCAGAACTCCACCGCGGCTATGGCAATCACCACCCTCTACTCCTACTCCTTCCAGACAACCGCAATCAAAATCACAACCTGTTATGCACCACTATCCACATAGTGAACCAGATATGGGAGGAACAAGAGGAATCTCGTTCCGTGATAAGCCAATGAGTGCAGGAAATTCTCCATTAATGGGTAATATCTTTGAAGACACACCTCCTCATCTAAGACATTTCTCAATGGATGACTGTAGAGAAATATCAATGGATCACAACCAAACTACTAACTTCAGCTTCTCATCAGAATTCTCATCAACCTCAATCTCTTCTTCTACTAGAGATATTGATGCAGAAATTAGAAGATTGAAGCAGGAACTGCAGCAAACTATAGACTTGTACAGCACAGCTTGCAAACAAGCCATCTCAGCCAAGAAAGAGGCTGAAATGATGCGGCATTTGAAAATGGAAGGGGAGAGAAGAGTTGAGGCGATTAGGATGTCTCAAGAGGCAGCTCTTGCCATTGCAGAAAGGGAGAAGGCAAGGGCCACGGCAGCCTGGGAGATGGCGGAGGATGCGAAGAAGAGGGCTGAACTGGAAGCACAGAGAAGAAGGGATGCAGAGTTGAAGGCGGCGAAAGAGGCAGAGGAGAAGGAGATGGCACTAACTGCTTTGGCTCACACCGATATGCGATGCAGGAGATACACCATGGAGGAGATTGAAGCAGCTACAGAGAAGTTCAACCCTTCAAGAAAAATTGGAGAAGGTGGATATGGTTCTGTCTATAAAGGTGATCTTGAAAATACCCCTGTTGCAATTAAGGTCTTAAATCCTGAAGCTGCTCAAGGAAGGAAACAGTTCCAACAAGAGGTTGAGGTACTAAGCTGCATTAGACATCCTAATATGGTTCTGCTCCTTGGTGCTTGTCCTGAATCTGGTTGCTTGGTGTATGAATACATGGACAATGGTACCTTAGAAGATAGATTGTTCCGGAAAGATAATTCACCACCTATGCCATGGAGGCTGCGGTTTAATATAGCTGCTGACATTGCAACTGCTCTCCTTTTCTTACACCAGGCGAAGCCAGAGCCGATTGTTCATCGTGATCTCAAACCAGCTAACATTCTTTTGGACAGGAATTATGTCACCAAAATCGCAGACATCGGTCTGGCAAGATTGGTTCCTCAATCTGTAGTGGACAATGTCACACAATATTACATGACCTCGGCTGCTGGAACATTCTGTTACATTGATCCTGAGTACCAACAAACTGGAATTTTGACCCCAAAATCAGATGTATATTCTTTGGGAGTAGTACTATTGCAAATAATCACAGCCAAACCTGCTATGGGACTTTCTCACCATGTTAGGAGGGCAATTTCAAAGGAAAAATTTGAAGATATGCTTGATCCTATGGTGTTTGATTGGCCAGTTGAGAAGGCTCTAGAATTTGCCAACTTAGCATTGGCCTGTTGTGAGCTCAGAAAGAAGGACAGGCCGAATCTCGCAACCGTTGTGTTGCCGGAACTTAATCGGTTAAGAGAATTTGGAAGATAG	2229	0.4486	MSPDKVTHSPTAYSSWHSSNLILSFFSSLSSSSQVPPVAVAARGVVPRHHVNKRMSSTFYDGKTPLAPNTTLVAVDKDKNSSYAFRWAVNHLDNPLVLAVHVKHKDNICSLRNDLVTVYEPDEDDVANVFGNLRGLCNRKAVQVKEAVIHESDVVRGIVEFASKNFIHTIVVGAPANKGALSRILRGHQTDVPTALLKSAPNFSSVYVISKWKIVSVRSATRAIQHALAPPRTPPRLWQSPPSTPTPSRQPQSKSQPVMHHYPHSEPDMGGTRGISFRDKPMSAGNSPLMGNIFEDTPPHLRHFSMDDCREISMDHNQTTNFSFSSEFSSTSISSSTRDIDAEIRRLKQELQQTIDLYSTACKQAISAKKEAEMMRHLKMEGERRVEAIRMSQEAALAIAEREKARATAAWEMAEDAKKRAELEAQRRRDAELKAAKEAEEKEMALTALAHTDMRCRRYTMEEIEAATEKFNPSRKIGEGGYGSVYKGDLENTPVAIKVLNPEAAQGRKQFQQEVEVLSCIRHPNMVLLLGACPESGCLVYEYMDNGTLEDRLFRKDNSPPMPWRLRFNIAADIATALLFLHQAKPEPIVHRDLKPANILLDRNYVTKIADIGLARLVPQSVVDNVTQYYMTSAAGTFCYIDPEYQQTGILTPKSDVYSLGVVLLQIITAKPAMGLSHHVRRAISKEKFEDMLDPMVFDWPVEKALEFANLALACCELRKKDRPNLATVVLPELNRLREFGR	742

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu08g00889	742	ProSitePatterns	Protein kinases ATP-binding region signature.	477	498	IPR017441	GO:0005524
	Adu08g00889	742	MobiDBLite	consensus disorder prediction	234	248	-	-
	Adu08g00889	742	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	589	601	IPR008271	GO:0004672\|GO:0006468
	Adu08g00889	742	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	69	190	-	-
	Adu08g00889	742	Gene3D	Phosphorylase Kinase; domain 1	439	543	-	-
	Adu08g00889	742	MobiDBLite	consensus disorder prediction	226	282	-	-
	Adu08g00889	742	ProSiteProfiles	Protein kinase domain profile.	471	734	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu08g00889	742	CDD	STK_N	70	211	-	-
	Adu08g00889	742	Coils	Coil	414	443	-	-
	Adu08g00889	742	SMART	serkin_6	471	734	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu08g00889	742	CDD	STKc_IRAK	477	737	-	-
	Adu08g00889	742	Gene3D	Transferase(Phosphotransferase) domain 1	544	740	-	-
	Adu08g00889	742	Gene3D	HUPs	47	201	IPR014729	-
	Adu08g00889	742	Pfam	Universal stress protein family	72	189	IPR006016	-
	Adu08g00889	742	PANTHER	OS02G0152300 PROTEIN	70	741	-	-
	Adu08g00889	742	Pfam	Protein kinase domain	473	729	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu08g00889	742	SUPERFAMILY	Protein kinase-like (PK-like)	453	730	IPR011009	-
	Adu08g00889	742	PANTHER	KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN	70	741	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu08g00889	Adu-Chr8	16386635	16390908	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu08g00889	146	742	Receptor kinase-like Gene Family	AT5G12000	53.895	0.0	632

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Adu08g00889		Pkinase	2.8e-42	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu08g00889	-		-	adu:107461003	1320.06