Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00882 ATGGAGGAGATGTCGACTACGGTTGCAGTGCCATTAACAGTAGGTAATTCGGTGTGTGATAAGCCAACCATAGCTACCCACATGGATGTATCTAGACTTAAGCTGATGACTGATACGGGGTTGTTAAGTAATTCTGTAACAGCGGTTTCTACTGAAACGTTTATAGGCTCTAATGAGGATCATAATGGTGGCAATCTTGAGGATGAAGTTGGTAGTGCAACAGTCAAACCATCAAAAAAGGGAAGTGAAGGAGAAATTCCTCTGGATGATATGATATCCCAGAATAAAAGCACTTTGGTTGGTGGTGATGAAGCTTCAACCCCAGAAATCGAGGAGGATGATACCTTATCATTGGAAGGTGATCCAATTATTGATAGCTCCTGTTCTCTTTCAGCAGCCAGTGAGAACAGTAGTATTTGTGGAGATGAGTTCATCAATTCGGAGGCCAATCCGGATTTAGGAACAAGAAGTTCCGTAGACATAGGAAAGAGCATGTGCGCTGTTGATGCTGTTGCCAGGGCTGCTGATTTAGGGGAGTCCAATTATGAGGCAGATATTATGAGTGAACCCCTTGCTGTAACGGTGAGCCTTGAAGAAGAGGCAGTAGTTGGATCTGTCACAAAGCCTACTACAGTTGTTCTTCATCAGCTACCGCTAGAAAAAGCGGTGGCTGGAACAGGTGGTCGAAGTGTTTTTGAATTGGACTGTACCCCGCTTTGGGGATTTATATCTTTGTGTGGAAAAAGACCCGAGATGGAAGACGCATTTGCAACAGTACCCCGATTCATGAAGATTCCTATTGAAATGCTAATTGGTGATAGGGTAATCGATGGACTGAATAAAAGTTTGAGTCAGCAAACAATTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAACTATTGTCGTGAGCGTATGCATTTGGCGTTGGCAGAGGAAATAGAATTAGTCAAGGAAGGTCTAAGAGTTGGAAGTAGCAAGGATGATTGTCAAGATCAATGGAAAAAAGCTTTCACCAATTGCTTTTTGAAGGTTGATGCTGAAGTTGGGGGAAAAGTTAACAATGAACCTGTTGCACCGGAGACTGTCGGATCAACTGCAGTTGTTGCTGCTATCTGTTCATCTCATATCATTGTTTCAAACTGTGGTGATTCAAGAGCAGTTTTGTGCCGTGGCAAAGAGCCCATGGCTTTATCTGTTGACCATAAACCCAATCGAGATGATGAATACGCAAGAATTGAGGCAGCAGGAGGGAAGGTGATCCAGTGGAATGGTCATCGTGTATTTGGTGTCCTTGCAATGTCACGATCTATCGGTGATAGATATTTGAAGCCATGGATCATTCCGGAGCCGGAAGTTACGTTTCTTCCCCGGACGAAAGACGACGAATGCCTCATTCTGGCGAGTGATGGCCTGTGGGATGTCATGACGAATGAAGAGGTGTGCGACCTAGCTAGGAAGCGAATACTTCTCTGGCACAAGAAAAATGGCCTGACACTGCCACCAGAAAGGGGAGAGGGAGTTGATCCTGCAGCACAAGCGGCTGCAGAGTACCTATCGAGCCGTGCCCTACAGAAGGGAAGCAAAGATAACATCACAGTAATTGTGGTGGACTTAAAAGCTCAAAGAAAATTCAAGAGCAAGACATGA 1662 0.4483 MEEMSTTVAVPLTVGNSVCDKPTIATHMDVSRLKLMTDTGLLSNSVTAVSTETFIGSNEDHNGGNLEDEVGSATVKPSKKGSEGEIPLDDMISQNKSTLVGGDEASTPEIEEDDTLSLEGDPIIDSSCSLSAASENSSICGDEFINSEANPDLGTRSSVDIGKSMCAVDAVARAADLGESNYEADIMSEPLAVTVSLEEEAVVGSVTKPTTVVLHQLPLEKAVAGTGGRSVFELDCTPLWGFISLCGKRPEMEDAFATVPRFMKIPIEMLIGDRVIDGLNKSLSQQTIHFFGVYDGHGGSQVANYCRERMHLALAEEIELVKEGLRVGSSKDDCQDQWKKAFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVAAICSSHIIVSNCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRTKDDECLILASDGLWDVMTNEEVCDLARKRILLWHKKNGLTLPPERGEGVDPAAQAAAEYLSSRALQKGSKDNITVIVVDLKAQRKFKSKT 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00882 553 Pfam Protein phosphatase 2C 272 536 IPR001932 -
Adu08g00882 553 SMART PP2C_4 229 541 IPR001932 -
Adu08g00882 553 SUPERFAMILY PP2C-like 236 544 IPR036457 -
Adu08g00882 553 CDD PP2Cc 244 543 IPR001932 -
Adu08g00882 553 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 126 553 - -
Adu08g00882 553 Gene3D - 226 553 IPR036457 -
Adu08g00882 553 MobiDBLite consensus disorder prediction 55 88 - -
Adu08g00882 553 ProSiteProfiles PPM-type phosphatase domain profile. 239 543 IPR001932 -
Adu08g00882 553 PANTHER ALPHABET, ISOFORM E-RELATED 126 553 - -
Adu08g00882 553 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00882 Adu-Chr8 16336420 16339208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00882 1 553 PP2C-type Phosphatase Gene Family AT1G17550 49.027 9.88e-168 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00882 K14497 - gmx:100803321 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00882 08 16336420 16339208 Adu08g00882 08 16336420 16339208 ECH