Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00878 ATGAGTAGTGATAAGAATAAAAAAGCAGCAGATTCACCTGAAAGCGGTGATTCCAGCAACCAGTGGTTCTTTGAGCTCTCTGACTACTTGAAGCTGAATGATGATGATGATCAATGGCCAGACGATGATAATGTTCCACCACCACTACCAGAAGCAGAGCCATTATTTTTTCCCAATACTAATGAAGTTGGAGATTTTGGAGCAAGTGGCAGCAGCGGCAGTAACCACCTTCAAGGGTCTTCTAATGCGCGAGAGGTTAGTGGAAGTGAGAAGAAAGATGCTAGTAGGGAGAGAGTTGCATTCAAAACCAAGTCCGAGGTTGAAATACTAGACGATGGTTACAGGTGGAGGAAGTATGGAAAGAAAATGGTTAAGAACAGCCCAAACCCAAGAAACTACTATAGGTGTACAGTGGATGGATGTCCGGTAAAGAAGAGAGTTGAAAGAGACAGGGAAGATCCCACATATGTAATTACAACCTACGAAGGAAATCATACTCACCCAACATCGTAG 513 0.4327 MSSDKNKKAADSPESGDSSNQWFFELSDYLKLNDDDDQWPDDDNVPPPLPEAEPLFFPNTNEVGDFGASGSSGSNHLQGSSNAREVSGSEKKDASRERVAFKTKSEVEILDDGYRWRKYGKKMVKNSPNPRNYYRCTVDGCPVKKRVERDREDPTYVITTYEGNHTHPTS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00878 170 MobiDBLite consensus disorder prediction 64 85 - -
Adu08g00878 170 MobiDBLite consensus disorder prediction 33 100 - -
Adu08g00878 170 SUPERFAMILY WRKY DNA-binding domain 103 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu08g00878 170 MobiDBLite consensus disorder prediction 1 21 - -
Adu08g00878 170 ProSiteProfiles WRKY domain profile. 105 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu08g00878 170 Pfam WRKY DNA -binding domain 111 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu08g00878 170 MobiDBLite consensus disorder prediction 86 100 - -
Adu08g00878 170 Gene3D WRKY domain 97 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu08g00878 170 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 10 169 - -
Adu08g00878 170 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 169 IPR044810 GO:0003700
Adu08g00878 170 SMART WRKY_cls 110 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00878 Adu-Chr8 16308403 16310283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00878 34 169 WRKY Transcription Factor Family AT5G26170 49.315 1.15e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu08g00878 WRKY 4.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00878 - - adu:107461015 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00878 08 16308403 16310283 Adu08g00878 08 16308403 16310283 ECH