Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00873 ATGAGTTTGAGAACCGCAGAGGACGATTCTTCGCCGTCGGAGATTCATCTTCCGGCAGAGATAGACTGGCACATGCTCGACAAGTCCAAGTTCTTCTTCCTCGGCGCCGCCTTATTCTCCGGCGTGTCCGCCGCACTTTACCCCATGGTTGTCCTGAAAACTCGGCAGCAAGTTTCTTCTGCAAAATACTCGTGCCTGAACATGTCCTGCGCCATTATGCGCTACGAAGGTTTCAGAGGCTTCTACAAAGGTTTCGGAACTTCTCTGATGGGAACTATCCCAGCTCGCGCACTCTACATGGCGGCACTCGAAGTCACAAAGAGCAATGTCGGAACCGGCCTCATCGAATTGGGTTTCTCCGACACCACAGCCGCCGCCATGTCTAACGCCGCCGCAGGTGTTACCTCTGCCATGGCGGCGCAACTCGTGTGGACCCCAATCGATGTTGTGAGCCAGAGACTCATGGTTCAAGGATGCAGCAGCAGCAATGGCGGTAGCAACAACAGCATGCTGAGAAACCTCAACTCAGAGAATTACAGGAACGGCATTGATGCTTTCAGGAAGATTCTGTGTGCTGATGGAGCGAGAGGGTTCTACAGAGGATTCGGTATTTCGATATTAACATACGCGCCTTCGAATGCAGTTTGGTGGACTTCATATTCAATGGTGCATAGAGTTATATGGAGTGCATTTGGTTGTTACATGTGTGACAATAGCAGCAATAATTTTAGGCCTGATTCAAGGGCCATGCTTGGAGTGCAAGGTTTGAGTGCGGTTGTCGCAAGTGGGGTGTCGGCGATTGTCACAATGCCGCTTGACACCATCAAGACCAGGTTGCAGGTTTTGGATGCGGACGACAATGGAAGAAGGAGGCCGTTGACTTTTGGTCAAACCATAAGGAACTTGGTTAAGGAAGGTGGTCTTTTAGCTTGTTACAGAGGCTTGGCTCCAAGGTGGGCTTCAATGTCCATGTCTGCTACAACCATGATCACTACCTACGAGTTCTTGAAACGCTTGTCTACTAAGTCTCAAGATAAATTTACTTGA 1047 0.4995 MSLRTAEDDSSPSEIHLPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQVSSAKYSCLNMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMAALEVTKSNVGTGLIELGFSDTTAAAMSNAAAGVTSAMAAQLVWTPIDVVSQRLMVQGCSSSNGGSNNSMLRNLNSENYRNGIDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRVIWSAFGCYMCDNSSNNFRPDSRAMLGVQGLSAVVASGVSAIVTMPLDTIKTRLQVLDADDNGRRRPLTFGQTIRNLVKEGGLLACYRGLAPRWASMSMSATTMITTYEFLKRLSTKSQDKFT 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00873 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 339 IPR018108 -
Adu08g00873 348 Pfam Mitochondrial carrier protein 255 343 IPR018108 -
Adu08g00873 348 Pfam Mitochondrial carrier protein 126 228 IPR018108 -
Adu08g00873 348 Pfam Mitochondrial carrier protein 40 109 IPR018108 -
Adu08g00873 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 346 - -
Adu08g00873 348 PRINTS Mitochondrial carrier protein signature 36 49 IPR002067 GO:0055085
Adu08g00873 348 PRINTS Mitochondrial carrier protein signature 199 217 IPR002067 GO:0055085
Adu08g00873 348 PRINTS Mitochondrial carrier protein signature 258 280 IPR002067 GO:0055085
Adu08g00873 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 346 - -
Adu08g00873 348 SUPERFAMILY Mitochondrial carrier 24 336 IPR023395 -
Adu08g00873 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 226 IPR018108 -
Adu08g00873 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 109 IPR018108 -
Adu08g00873 348 Gene3D Mitochondrial carrier domain 29 347 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00873 Adu-Chr8 16275302 16276348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00873 1 347 Chloroplast and Mitochondria Gene Families AT1G72820 63.483 1.80e-160 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00873 K15121 - gmx:100784202 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00873 08 16275302 16276348 Adu08g00873 08 16275302 16276348 ECH
Adu06g02701 06 103451158 103455930 Adu08g00873 08 16275302 16276348 PCT