Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00862 ATGTCCAAGATACCCCTCCGCATTCGCAGGTTCTCTCTACATTTCTTCTTCCTGCTTACCCTCACACTGTCCTCCGATGTCATTTCACAAACCACCGAACAAACCACCCTTCTCACCTTCAAACACCAACTAGGCAATCCGCCGTCACTACAATCATGGCAACCGTCGCCGTCGTCGTCTCCGTGCGGGTGGCAGGAAGTCCGGTGCACCGGTGGCGCAGTCACGGAGCTTCTCCTCGCCAATAAGGATATCACCGTGAAGAACCTCCCGGCGCCGACGATCTGCGACGGCCTCAGGAACCTCACGAAGCTCGACCTCTCCAACAACTCTATCTCCGGTGAGTTTCCGACCTCACTCTACAATTGCTCCAATCTCAACTACCTCGACCTCTCACAGAACTACCTGGCCGGAAAAATTCCCGACGACGTCGACCGCCTCAGAACCCTAACGTACCTCAACCTTGGCGGCAACAGCTTCATCGGAGACGTTCCTCCGGCCATCGGAAACCTGCCGGAACTCAGAACCCTCCACCTCTTCCAGAACAACTTCAACGGAACGTTAGCAAAAGAAATCGGAAACCTCTCCAATCTGGAAATCCTTGGTCTTGCCTTTAATTACCGTCTTGCCCCTGCGCCGATCCCGGTCGACTTTGGGAACCTGACGAACCTGAAGTTCTTGTGGCTGTCTCAGTGCAACTTGACTGGAGAGATTCCCCCGAGTTTCGCGAAACTGGAGAATCTTGAAAAGTTGGATTTATCAATGAACAACTTAACAGGGAGAATTCCTACTAGCTTGTTTTCTTTAAGAAATTTGACGTTTTTGTATCTGTACCACAATAAGTTGTTTGGTGAGATACCAAATTCGGTGCAAGCTTTGAACCTGGCTGGGGTTGATTTGAGCATGAACAATTTGACAGGTTCTATACCAAAAGATTTTGGAAAGTTGAACAACTTGACGGCTTTGCTGCTGTATTATAACCAGTTGAGTGGTGAGGTTCCAAATGGTTTAGGATTATTACCAAAGCTTAGTAATTTTAGTGTTTTTGGGAACAAACTGAATGGAACTCTGCCTCCGGAATTCGGCAGGCATTCGAGGCTGGTGGGGTTTGAGGTTGACAGCAATCAGTTGAGTGGAGGGCTGCCGGAGCATTTGTGTGACGGCGGTGCTCTGAGGGGTGTGGTGGCTTTCTCCAATGATCTGAGTGGTGACTTGCCTCAATGGCTTGGGAATTGTAGTTCTCTTGTCACAGTTCAGCTTCACAATAACAGGTTTTCAGGGGAGGTTCCTTTGAGTTTGTGGACTTCGAGGAGCCTTGAGAGCTTGATGCTGAGCAACAACTCGTTTTCCGGTCAGATTCCAAGAGAATTGTCCCGGAGTATGACAAGGTTGGAGATCAGAGACAACAAGTTTTCTGGTCCAATATTGCTTGGTGTTTCTTCTGTTGTGAATCTTGTGGTTTTTAAGGCAGGAAACAACATGCTTTCCGGTGAGATTCCAAGAGAATTGACCGGTATTTCTCAGATGACAACTCTCATGCTTGATGGGAATCAACTTTCCGGTACGCTTCCATCCGACATAATTTCATGGAAGTCGTTGAACACTTTAACCCTATCAAGAAACAACCTTTCAGGTCAAATCCCACTAGCTATGAGTACTCTTCCTAGTCTGGTTTACTTGGATTTGTCTGAAAATGAGTTGTCTGGTGAAATACCAACTCAGTTAGGCGACTTGAGGTTTGTTTTTCTCAACTTGTCCTATAATAAGCTTTCTGGGAACATCCCAGATGAGCTTAACAACCTCGCCTATGAAAGTAGTTTCTTGAACAATCCCAATCTGTGTGCTTATGATCCAAAAGTCATTCTATCTAATTGCTTAACTAAAACCTCATCCCACTCCAGCAATTCATCTAAAAAGTTCTTTGCCTTGATTCTTGGGGTCATCGTCATTGTATTGTTAGCCGCTGCCCTCTTGGCATTGTGCAAGCTGACAAAGCAACGGGGTAAAAAGCTGAGTTGTGGCCGTAAGCTTTCAACATGGAGGCTCACTTCATTCCAGAGGCATGACCTCACAGAAATTAATCTCTTCTCAAGCTTGACAGACAGCAACCTTATTGGAAGTGGAGGCTTTGGAAAAGTTTACCGGATCGCTTCAAATCGCCCAGGTGAGTATGTTGCTGTGAAGCAGATTTGGAGTGACAAGGATGTGGATCACAAGCGGGAGAAAGAGTTTATGGCTGAGGTTGAAATCTTGGGCAACATTAGGCATTCTAATGTAGTGAAACTCTTGTGTTGCTATTCAAGTGAGAACTCAAAGCTTCTTGTATACGAGTACATGGAAAATCATAGCCTTGACAAATGGCTTCATGGAAAGAATAAAAAGTCACCAATTGGTTTGAGTACACCCAACAGGACTCATGCGGTGTTGAGTTGGCCAACGAGGTTGAAGATTGCCATTGGAGCTGCACAAGGCCTATGTTACATCCACCACGAGTGCTCACCATCAATCATCCATCGCGATGTTAAGTCTAGCAATATACTATTAAACTCCGAATTCAAGGCTAGTATAGCAGATTTTGGACTCGCCACGATGCTGTTAAAGCCAGGGGAGCTGCACACCATGTCTGCTTTAGCAGGGTCTTTTGGCTACATTCCACCAGAATATGCTTATTGTAGCAAGATCAATGAGAAAGTCGATGTATATAGTTTTGGGGTTGTGCTCCTAGAGCTTGTGACTGGAAGAGAGCCTAAATGTGGAGAAGATGGAAGCAGCCTAGTTGACTGGGCATGGAGGCAATACAGTGAGGGGAAGTGTCTTGCTGATGTCTTAGATGAGGATATCAAAGAAACATGCCACGTGGAAGATATGACTACTGTCTACAAACTAGGGCTCATTTGCACAAGCTCATTACCCTCATCTAGGCCTTCCACAAGGGAGATTTTGCAAGTTCTTCGTCAGTGTTGTCACCCAGGTTCTTCACGTAAGAGAGTGGCAACTGACTTTGACATAACTCCCCTACTTAGTGATGCTAGGTACATAGCCAGTTACAAGGACAGTAATGTTACAAGCGAGAACGAAGAAAGCCGCTTGTATAGTAGTGTGTAA 3102 0.46 MSKIPLRIRRFSLHFFFLLTLTLSSDVISQTTEQTTLLTFKHQLGNPPSLQSWQPSPSSSPCGWQEVRCTGGAVTELLLANKDITVKNLPAPTICDGLRNLTKLDLSNNSISGEFPTSLYNCSNLNYLDLSQNYLAGKIPDDVDRLRTLTYLNLGGNSFIGDVPPAIGNLPELRTLHLFQNNFNGTLAKEIGNLSNLEILGLAFNYRLAPAPIPVDFGNLTNLKFLWLSQCNLTGEIPPSFAKLENLEKLDLSMNNLTGRIPTSLFSLRNLTFLYLYHNKLFGEIPNSVQALNLAGVDLSMNNLTGSIPKDFGKLNNLTALLLYYNQLSGEVPNGLGLLPKLSNFSVFGNKLNGTLPPEFGRHSRLVGFEVDSNQLSGGLPEHLCDGGALRGVVAFSNDLSGDLPQWLGNCSSLVTVQLHNNRFSGEVPLSLWTSRSLESLMLSNNSFSGQIPRELSRSMTRLEIRDNKFSGPILLGVSSVVNLVVFKAGNNMLSGEIPRELTGISQMTTLMLDGNQLSGTLPSDIISWKSLNTLTLSRNNLSGQIPLAMSTLPSLVYLDLSENELSGEIPTQLGDLRFVFLNLSYNKLSGNIPDELNNLAYESSFLNNPNLCAYDPKVILSNCLTKTSSHSSNSSKKFFALILGVIVIVLLAAALLALCKLTKQRGKKLSCGRKLSTWRLTSFQRHDLTEINLFSSLTDSNLIGSGGFGKVYRIASNRPGEYVAVKQIWSDKDVDHKREKEFMAEVEILGNIRHSNVVKLLCCYSSENSKLLVYEYMENHSLDKWLHGKNKKSPIGLSTPNRTHAVLSWPTRLKIAIGAAQGLCYIHHECSPSIIHRDVKSSNILLNSEFKASIADFGLATMLLKPGELHTMSALAGSFGYIPPEYAYCSKINEKVDVYSFGVVLLELVTGREPKCGEDGSSLVDWAWRQYSEGKCLADVLDEDIKETCHVEDMTTVYKLGLICTSSLPSSRPSTREILQVLRQCCHPGSSRKRVATDFDITPLLSDARYIASYKDSNVTSENEESRLYSSV 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00862 1033 Gene3D Ribonuclease Inhibitor 459 644 IPR032675 -
Adu08g00862 1033 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Adu08g00862 1033 SMART LRR_sd22_2 315 347 - -
Adu08g00862 1033 SMART LRR_sd22_2 268 287 - -
Adu08g00862 1033 SMART LRR_sd22_2 98 124 - -
Adu08g00862 1033 SMART LRR_sd22_2 220 249 - -
Adu08g00862 1033 Gene3D Ribonuclease Inhibitor 28 210 IPR032675 -
Adu08g00862 1033 SUPERFAMILY Protein kinase-like (PK-like) 692 983 IPR011009 -
Adu08g00862 1033 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 17 999 - -
Adu08g00862 1033 ProSiteProfiles Protein kinase domain profile. 698 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00862 1033 ProSitePatterns Protein kinases ATP-binding region signature. 704 727 IPR017441 GO:0005524
Adu08g00862 1033 SUPERFAMILY L domain-like 41 381 - -
Adu08g00862 1033 SUPERFAMILY RNI-like 293 601 - -
Adu08g00862 1033 SMART serkin_6 698 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00862 1033 PRINTS Leucine-rich repeat signature 244 257 - -
Adu08g00862 1033 PRINTS Leucine-rich repeat signature 101 114 - -
Adu08g00862 1033 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 17 999 - -
Adu08g00862 1033 Gene3D Ribonuclease Inhibitor 211 458 IPR032675 -
Adu08g00862 1033 Pfam Leucine rich repeat 222 281 IPR001611 GO:0005515
Adu08g00862 1033 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Adu08g00862 1033 Pfam Leucine rich repeat 507 566 IPR001611 GO:0005515
Adu08g00862 1033 SMART LRR_typ_2 553 577 IPR003591 -
Adu08g00862 1033 SMART LRR_typ_2 220 243 IPR003591 -
Adu08g00862 1033 SMART LRR_typ_2 315 339 IPR003591 -
Adu08g00862 1033 SMART LRR_typ_2 98 122 IPR003591 -
Adu08g00862 1033 SMART LRR_typ_2 244 268 IPR003591 -
Adu08g00862 1033 SMART LRR_typ_2 170 194 IPR003591 -
Adu08g00862 1033 SMART LRR_typ_2 505 529 IPR003591 -
Adu08g00862 1033 SMART LRR_typ_2 436 459 IPR003591 -
Adu08g00862 1033 Gene3D Phosphorylase Kinase; domain 1 679 777 - -
Adu08g00862 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Adu08g00862 1033 Pfam Protein kinase domain 700 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00862 1033 Gene3D Transferase(Phosphotransferase) domain 1 778 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00862 Adu-Chr8 16075213 16078480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00862 27 1006 Receptor kinase-like Gene Family AT5G25930 53.917 0.0 1011
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu08g00862 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00862 - K00924 adu:107461025 1953.33