Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00839 ATGGATCGTCCATTCATTCTCTTTGTTATTGGAGTCATGTTTGTGTTTTCATCATCAGAAGGTGCTACAACCACAAACCAGTCTGAATTTTTCAGCCTCATGAAGGCTTCTCTCTCAGGAAACTGGAATACTTACAACAACAACAACCAAGGTGTCTGCAAGTTAAGAGGAGTGACATGCAACGAAGAAGGTGACGTCACCATTCTCGACCTCACAAGCTGGTCATCACTCTCCGGAAACTTCCCTTCGGGTCTATGCAATTACCTTCCTAACTTACAAGTCCTTCGCATGGGTTATACTAAGTTCAAGTTCCCCACAGAATCCATAACCAACTGCTCCAACTTGCAAGAACTCAACATGAACCACATGTTCCTATCAGCAGAACTCCCTGACTTTTCGCCATTGAAGAACCTCAGAGTCCTCGACTTGTCCTATAACCTCTTCAAAGGAGACTTCCCCATGTCCGTCTTCAACCTCTCCAACCTCGAGATCCTCAACTTCAACGAGAACCCAGGCTTCAACTTCTGGAAGCTTCCGGAAACCTTTAACTTCAAGAAGCTCAACTCCATGGTTTTAACAACTTGCTCTTTGCATGGCCAGATCCCTGCCGCGTTAGGGAACTTAACAACGCTCGTTGATCTTGAACTCAGTGGAAACCTCTTCACCGGACAAATTCCCAGGGAGCTTGGCCTTCTGAAGAATCTTCAGGAGCTTGAGCTTTACTATAACTACCACCTCGTCGGAAACATACCTGAGGAGCTCGGGAATCTAACGGAGCTAACAGATTTGGACATGTCCGTCAACAAGCTAACCGGAAAAATCCCTGCTTCCATTTGTAAGCTTCCAAAGCTTCAAGTTCTTCAGCTCTACAACAACAGCCTCGTCGGAGAGATACCAGGTGAGTTAGAGAACTCAACTGCGTTGAGGCTCTTGTCGCTTTACGACAACTTCTTGAACGGAACGGTGCCGGAAAAGCTAGGACAATTCTCCCGCATGGAGGTTCTGGATTTGTCGGAGAACAGCCTCTCCGGTCCGTTGCCGACGGAAGTTTGCAAGGGAGGTAAGCTGTTATACTTTCTTGTACTGGATAACAACTTGTCTGGCGTGATACCTGACGGTTACGCTAACTGCATGATGCTGTTACGGTTCCGCGTGAGTAACAATCGGTTACAGGGCCCGATTCCCGAGGGCCTGCTGAGCTTGCCACACGTGTCAATCGTTGATTTGAGCAGCAACAACCTAAGCGGCGTGATTCCGGAGATTAACGGTAATTCAAGAAACCTCTCGGAGCTCTTCCTACAGAGGAACATGATATCCGGTGTGATACCCGCGTCCATTTCACGCGCTCCAAACCTCGTGAAGATTGATTTCAGTTGTAACCGTCTCTCTGGTCCCATTCCTTTCCAGATCGGAAACCTGAGGAAGCTGAATTTGCTTATGCTGCAAGGGAACAAGTTGACTGACTCGATTCCAAGTTCGCTTTCTTCTCTCTCATCGCTTAACCTTCTAGATCTTTCTAACAACCTTCTCACCGGTTCCATTCCGGAGAGCCTCTCTGTTTTGCTTCCCAACTCTATCAATTTCTCACACAATCTTCTCTCTGGTCCCATTCCTCCCAAACTCATCAAAGGAGGATTGGTCGAAAGCTTTTCCGGGAACCCTGGATTGTGTGTTCTTCCATCCTCTAACTCCTCTAATCAAAACTTTCCTCTCTGTAATTCGCACCAGTACAAGAGCAAGAGACTCAACACTGTTTGGGTGGCTGCGATTTCCGTGTTTTTTATCCTTGTTGGAGCCATGCTGTTCTTGAAACGCAGATGCAGCAAGGAAACAGCTGCAGTTGAACACGACGAGACGCTTTCTTCGTCGTTCTTCTCTTACGATGTGAAGAGCTTCCATAGGATTACTTTCGATCAAAGAGAGATAATTGAGTCGTTGGTGGACAAGAACATAATGGGGCATGGAGGGTCAGGGACGGTGTACAAAATCGAGCTAAAGAGCGGTGATGTTGTGGCAGTTAAGAGACTGTGGAGCACGAAATCTAAAGATCGGTTAGTTGTGGATAAAGCATTGAAGGCGGAGGTGGAGACGTTAGGGAGCATAAGGCACAAGAACATAGTGAAACTCTATTGTTGCTTCTCTAGTATGGATTGCagcttgcttgtttatgaatacatgcctaatgggaacttgtgggacgcgcttcacaaaggttggatccatttggattggcctacacgctaccagattgcgcttgggatcgctcaggggctctcctaccttcaccatgatttggtttttccggtcatacatagggatatcaagtccactaacattctcttggatgttgataaccatcctaaggttgcagattttggaattgctaaggttttgcaagctagaggagccaaggattctaccactactgttattgctggaacttatggttacttagccccagAATATGCATATTCACCAAGGGCCACAACAAAGTGTGATGTGTACAGTTTCGGTGTGATTCTAATGGAGCTTCTAACTGGGAGAAAGCCGGTGGAGGCTGAATTTGGAGAGAACAGGAACATAGTATTTTGGGTCTCAAACAAAGTTGAAGGCAAAGAAGGTGCAAGACCAAGTGAAGTTTTTGATCCAAGATTATCAAATTCATTCATAGATGACATGATTAAGGTTCTTAGGATTGCAATTAGGTGCACCTACAAAGCACCATCTAGTAGACCAACCATGAAGGAGGTTGTTGAGCTTCTCATTGAGGCAGAGCCATGCAAGTTGGCATCAAATAATGTCACCATAATAAAGAAACCATATGAAGTATAG 2832 0.4093 MDRPFILFVIGVMFVFSSSEGATTTNQSEFFSLMKASLSGNWNTYNNNNQGVCKLRGVTCNEEGDVTILDLTSWSSLSGNFPSGLCNYLPNLQVLRMGYTKFKFPTESITNCSNLQELNMNHMFLSAELPDFSPLKNLRVLDLSYNLFKGDFPMSVFNLSNLEILNFNENPGFNFWKLPETFNFKKLNSMVLTTCSLHGQIPAALGNLTTLVDLELSGNLFTGQIPRELGLLKNLQELELYYNYHLVGNIPEELGNLTELTDLDMSVNKLTGKIPASICKLPKLQVLQLYNNSLVGEIPGELENSTALRLLSLYDNFLNGTVPEKLGQFSRMEVLDLSENSLSGPLPTEVCKGGKLLYFLVLDNNLSGVIPDGYANCMMLLRFRVSNNRLQGPIPEGLLSLPHVSIVDLSSNNLSGVIPEINGNSRNLSELFLQRNMISGVIPASISRAPNLVKIDFSCNRLSGPIPFQIGNLRKLNLLMLQGNKLTDSIPSSLSSLSSLNLLDLSNNLLTGSIPESLSVLLPNSINFSHNLLSGPIPPKLIKGGLVESFSGNPGLCVLPSSNSSNQNFPLCNSHQYKSKRLNTVWVAAISVFFILVGAMLFLKRRCSKETAAVEHDETLSSSFFSYDVKSFHRITFDQREIIESLVDKNIMGHGGSGTVYKIELKSGDVVAVKRLWSTKSKDRLVVDKALKAEVETLGSIRHKNIVKLYCCFSSMDCSLLVYEYMPNGNLWDALHKGWIHLDWPTRYQIALGIAQGLSYLHHDLVFPVIHRDIKSTNILLDVDNHPKVADFGIAKVLQARGAKDSTTTVIAGTYGYLAPEYAYSPRATTKCDVYSFGVILMELLTGRKPVEAEFGENRNIVFWVSNKVEGKEGARPSEVFDPRLSNSFIDDMIKVLRIAIRCTYKAPSSRPTMKEVVELLIEAEPCKLASNNVTIIKKPYEV 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00839 943 SUPERFAMILY L domain-like 175 419 - -
Adu08g00839 943 Gene3D Ribonuclease Inhibitor 25 177 IPR032675 -
Adu08g00839 943 Pfam Protein kinase domain 648 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00839 943 ProSiteProfiles Protein kinase domain profile. 646 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00839 943 Gene3D Transferase(Phosphotransferase) domain 1 726 936 - -
Adu08g00839 943 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
Adu08g00839 943 SMART LRR_typ_2 401 424 IPR003591 -
Adu08g00839 943 SMART LRR_typ_2 208 232 IPR003591 -
Adu08g00839 943 SMART LRR_typ_2 473 496 IPR003591 -
Adu08g00839 943 SMART LRR_typ_2 497 521 IPR003591 -
Adu08g00839 943 SMART LRR_typ_2 135 159 IPR003591 -
Adu08g00839 943 SMART LRR_typ_2 281 305 IPR003591 -
Adu08g00839 943 SMART LRR_typ_2 329 353 IPR003591 -
Adu08g00839 943 SUPERFAMILY L domain-like 357 555 - -
Adu08g00839 943 SUPERFAMILY Protein kinase-like (PK-like) 633 921 IPR011009 -
Adu08g00839 943 SMART serkin_6 646 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00839 943 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR1 6 933 - -
Adu08g00839 943 Gene3D Phosphorylase Kinase; domain 1 629 725 - -
Adu08g00839 943 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 933 - -
Adu08g00839 943 Gene3D Ribonuclease Inhibitor 178 277 IPR032675 -
Adu08g00839 943 Gene3D Ribonuclease Inhibitor 289 568 IPR032675 -
Adu08g00839 943 SUPERFAMILY L domain-like 48 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00839 Adu-Chr8 15613581 15617340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00839 19 926 Receptor kinase-like Gene Family AT5G49660 63.272 0.0 1163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu08g00839 Pkinase 9.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00839 - - gmx:100785822 1448.72