Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00831 ATGGCTCAATTCCGGCGAACTCTGTCGCCGGCGTATCATGATCGGCAGTACCCGAACGGCGCCGGCGGTGTCTTATCTGTTTCATCTACGTCTCACAAGTTCTCTTCCACAAACGCCAAGTACACATCTCCGTTTCCGGCGCTGGCGACTAGTGCGGCGGCGCTCCGGAAGTTTCTCGCCGGATTCTTTGTCCGGAGGTACGGCCGGAAAGGACAGTGGAGGAAGGCTCTGTACCGTTGCCTGCTATGCTTCTTCGTCGGTTTCATGCTCGGAATGTTTCCATTCGGCCACCACGTCGTCGTCGACGACGTTCGCCCTAGCGACATGTCGTTCGAGATCAAGCCACCTCACGCCAACGCGCAGTTGCTTCAGGAGAATCACGTTCTCAAGAACCGCGTCGGCGGAAAAGAAGGAACCGAAGTAGTTGAAGCCGCGGTCGGTGGCGGCAGCGATAGCGGCAGAGAGAGCGGTTTCATCATCGATCCGGTGAGCCTGAGCGTAGCGAACCATCACTCGATAGCGGAGCGCTTCGATTTCGTGCCGCGGAAGCAGCTGATTGTGGTAACACCGACCTATAACCGTGCTTTACAGGCGTATTTCTTGAATAGGCTGGGGCAGTTACTGCGGCTGGTGCCTCCGCCAGTGCTGTGGGTTGTGGTGGAGATGAATGCGGCGTCAATGGAGACGGCGGAGTTGCTGAGGAAAACGGGAGTGATGTATAGGCACTTGGTTTGCGCTAAGAACTCGACTGATGTGAAGGACAGAGGAGTTCATCAGAGGAACACGGCGTTGGAGCACATTGAGCGCCATAAGCTTGATGGAATCGTTTACTTTGCGGATGATGATAATGTGTATTCGCTTGAGTTGTTCGATACCTTGAGAGACATCAGTCGCTTTGGCACTTGGCCTGTTGCTATGCTAGCACCCAGCAAGAACAAGGCTATTTTGGAGGGCCCTGTATGCAATGCAAGCCAAGTGATTGGATGGCATACAAACGAGAAAAGTAAAAGACTTCGTAGGTTTCATGTTGATATGTCTGGATTTGCTTTTAATAGCACAATCCTGTGGGATCCAAAGCGATGGCGACGCCCTACTACAAATCCTATTCGACAATTGGATACGGTGAAAGAGGGTTTTCAAGAGACGACCTTTATAGAGCAATTGGTGGAAGATGAGAATCAAATGGAAGGGTTGGCTGCTTCAGAAAAACCTAGATGCTGTGGTCCCTGTCAACTAATCCTTCTCCGAATCTATTGTGAATGTGTGATAGTTTGCCCATATTTGGTATTGGTTATACACAGCTATGTATTAGAGGGTTTGAACTTTGAAGGCGAATATTTCTACATTGAACGGACTCCGATGGTAGACAATTATTTACTTGTTACAAGGACAACAATTAGGCAAACCCTAGCCTCCACCAATAGCTGCCGCCGTCTGTTGGATGAGAGACTGCTGCCGCCGTCCATCGCACTCAAGAACTTCCGTCTTCGTGCTCTTGGGCCTCTCGCCGGATCCTCCACGTCGGGTGTTCGCATCTCGCCGTTCTCCTCTGTGCTCGGCTGCTCGCGCCTCCCTCCGCCAGTGAGTGCTCGAGCTTCACTGGCATCTCGTGGTTCGTCTGTCTCGTCGCCGGCGGTAGAAGCAACTCGTGGGGTTGTCTCTTGCTTCGTCGCCTTCCGTGGGGTGGTCGCCGACTCGCCGTCGACCGTTGCTGCTGTGAGGAAGGAAATTTCAGATGAAACAGATCGCATAACCGGGAAAACGAAACAAATTTCTAACATTCCAATTCAACTCGGCATTTATTCGCCACATGTTGTAAACTTAACCCTTATAGATCTTCCTGGGTTGACAAAGGTTGCAGTAGGTAAACCTCAAAATAGGCCCGCTTGCTCCTCCTTCACCAACCGAATCTCCATTCAGTTTCCTCTTCGTCTCTGTTCGAAGTTGGAAGCCTTTGCACactctgcaacttcaagcgcacactctgcaatttcaatgctcacaagaagaaaaatcctcaatttattctcaacccaattcGCTTCTCACCAATTCAATGCAGTTTCGAAGTTATCACGAGTTCCTTCGCACCCTTATTCTGAAATCCACAAAACCCTAAACCCCTTTAGGGTTTTTCTTTTGTGCGCATGGAATTCGACGCAAGCATCGAAATTTCCCGAATACGAGATGCCATCGGTGACGTGGGGTGTGATTCAAGGTCGCAAGGAGAAGCTGGTATCGCGGGTCATCGTATTCGACTTCCTCAGGGGTTTGGGAATTGTCCCTAACGAGTTGCAGGACCTTGAGCTACCTTCGACAGTTGAAGTCATGAGGGAGCGCGTGGAGTTCCTCCAGAAACTAGGGCTAACAATTGATGACATCAACGATTACCCTTTGATGTTGGGATGCAGTGTGAGGAAGAACATAATTCCTGTTTTGGGGTACTTGGAAAAAATTGGGATTTCAAGATCCAAACTTGGGGGATTCATTAAGAGCTACCCGCAGGTATTGCATGCTAGTGTGATTGTTGAGCTTGTCCCTGTTGTGAAGTTCCTTAGGGGACTTGATGTGGAGAGGGAGGATATTGGGTATGTGTTGCAGAAGTACCCTGAACTTCTAGGGTTCAAGCTTGAGGGTACTATGAGTACATCAGTGGCTTATCTTGTTAGTATTGGGGTTAATCCTAGGGATATTGGTCCCATGGTGACTCAGTATCCTTATTTTTTGGGGATGAGAGTTGGGACTGTGATCAAGCCTTTTATTGATTACTTAGTCTCTTTGGGACTGCCAAAGAAGATTTTGGCTAAGATGTTGGAGAAGAGGAGCTATTTGCTTGGATATGATCTTGAAGAGACTATCAAGCCAAATGTGGATTGTTTGATTAGCTTTGGGATAGGGAGGGAGTGTTTGCCTTCGGTTATTGCACAGTATCCTCAGATTCTTGGATTGCCCCTCAAAGCCAAGTTGTCTTCGCAGCAGTACTTCTTCAGTTTAAAGCTTAAGATTGATCCTGAAGGTTTTGCGCGAGTCGTGGAGAAGATGCCGCAGGTGGTTAGCCTTCACCAAAACGTGATCATGAAGCCGGTCGAGTTCCTCCTCGGAAGGGCTATAGCACTGCATGATGTGGCTAGCATGGTGGTCAAGTGTCCGCAGTTAGTAGCACTGAGAGTGGAGCTCATGAAGATCAGTTTTTACTTCTTTAAGAGTGAGATGGGAAGACCACTGAAAGAGCTTGTAGAGTTCCCTGAATACTTTACTTACAGTCTGGAGTCTAGGGTCAAACCAAGATACCAAAGGCTAAAGAGCAAGGGGATAAGGTGTTCATTGAATTGGATGCTGAATTGTAGTGACCAGAGATTTGAAGAGAGGTTGCAGGGTAATTATATTGAGACTGAAAGTACAGGTCCGACATTTTTAATGGGTGGGAAATTGAACCTGCCAGGTAATGCAATTCTTTCAGATGAGGAAGAGGAGAGTGATGATGAAGTACTATACCGAAGAACTGTTTCTTTATAG 3516 0.475 MAQFRRTLSPAYHDRQYPNGAGGVLSVSSTSHKFSSTNAKYTSPFPALATSAAALRKFLAGFFVRRYGRKGQWRKALYRCLLCFFVGFMLGMFPFGHHVVVDDVRPSDMSFEIKPPHANAQLLQENHVLKNRVGGKEGTEVVEAAVGGGSDSGRESGFIIDPVSLSVANHHSIAERFDFVPRKQLIVVTPTYNRALQAYFLNRLGQLLRLVPPPVLWVVVEMNAASMETAELLRKTGVMYRHLVCAKNSTDVKDRGVHQRNTALEHIERHKLDGIVYFADDDNVYSLELFDTLRDISRFGTWPVAMLAPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPTTNPIRQLDTVKEGFQETTFIEQLVEDENQMEGLAASEKPRCCGPCQLILLRIYCECVIVCPYLVLVIHSYVLEGLNFEGEYFYIERTPMVDNYLLVTRTTIRQTLASTNSCRRLLDERLLPPSIALKNFRLRALGPLAGSSTSGVRISPFSSVLGCSRLPPPVSARASLASRGSSVSSPAVEATRGVVSCFVAFRGVVADSPSTVAAVRKEISDETDRITGKTKQISNIPIQLGIYSPHVVNLTLIDLPGLTKVAVGKPQNRPACSSFTNRISIQFPLRLCSKLEAFAHSATSSAHSAISMLTRRKILNLFSTQFASHQFNAVSKLSRVPSHPYSEIHKTLNPFRVFLLCAWNSTQASKFPEYEMPSVTWGVIQGRKEKLVSRVIVFDFLRGLGIVPNELQDLELPSTVEVMRERVEFLQKLGLTIDDINDYPLMLGCSVRKNIIPVLGYLEKIGISRSKLGGFIKSYPQVLHASVIVELVPVVKFLRGLDVEREDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTVIKPFIDYLVSLGLPKKILAKMLEKRSYLLGYDLEETIKPNVDCLISFGIGRECLPSVIAQYPQILGLPLKAKLSSQQYFFSLKLKIDPEGFARVVEKMPQVVSLHQNVIMKPVEFLLGRAIALHDVASMVVKCPQLVALRVELMKISFYFFKSEMGRPLKELVEFPEYFTYSLESRVKPRYQRLKSKGIRCSLNWMLNCSDQRFEERLQGNYIETESTGPTFLMGGKLNLPGNAILSDEEEESDDEVLYRRTVSL 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00831 1171 Pfam mTERF 813 1121 IPR003690 GO:0003690|GO:0006355
Adu08g00831 1171 SMART mt_12 791 822 IPR003690 GO:0003690|GO:0006355
Adu08g00831 1171 SMART mt_12 971 1003 IPR003690 GO:0003690|GO:0006355
Adu08g00831 1171 SMART mt_12 1008 1038 IPR003690 GO:0003690|GO:0006355
Adu08g00831 1171 SMART mt_12 935 966 IPR003690 GO:0003690|GO:0006355
Adu08g00831 1171 SMART mt_12 1075 1106 IPR003690 GO:0003690|GO:0006355
Adu08g00831 1171 SMART mt_12 1043 1074 IPR003690 GO:0003690|GO:0006355
Adu08g00831 1171 SMART mt_12 899 930 IPR003690 GO:0003690|GO:0006355
Adu08g00831 1171 SMART mt_12 827 858 IPR003690 GO:0003690|GO:0006355
Adu08g00831 1171 SMART mt_12 863 894 IPR003690 GO:0003690|GO:0006355
Adu08g00831 1171 Pfam Glycosyltransferase family 43 204 400 IPR005027 GO:0015018|GO:0016020
Adu08g00831 1171 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 183 408 IPR029044 -
Adu08g00831 1171 SUPERFAMILY Nucleotide-diphospho-sugar transferases 184 401 IPR029044 -
Adu08g00831 1171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 570 623 IPR027417 -
Adu08g00831 1171 PANTHER CGI-12 PROTEIN-RELATED 716 1154 IPR003690 GO:0003690|GO:0006355
Adu08g00831 1171 Gene3D - 516 631 IPR027417 -
Adu08g00831 1171 Pfam Dynamin family 567 623 IPR045063 -
Adu08g00831 1171 Gene3D Transcription termination factor 3, mitochondrial 918 1131 IPR038538 -
Adu08g00831 1171 Gene3D Transcription termination factor 3, mitochondrial 777 917 IPR038538 -
Adu08g00831 1171 PANTHER EXPRESSED PROTEIN 716 1154 - -
Adu08g00831 1171 CDD GlcAT-I 185 399 IPR005027 GO:0015018|GO:0016020
Adu08g00831 1171 SMART dynamin_3 481 705 IPR001401 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00831 Adu-Chr8 15372402 15381366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00831 1 398 Glycosyltransferase AT1G27600 59.453 3.77e-151 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu08g00831 mTERF 4e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00831 K15032 - gmx:100809590 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00831 08 15372402 15381366 Adu08g00831 08 15372402 15381366 ECH