Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00821 ATGGAGATCTTCTATGACGATCACCATGATTTCTTAGAGGAACTCATGGCTCTAAGAAGAGAAACATTCATGGAAACCAATTACAACAACACCACCACTTTTCATTCTTCTTTTCCCCCAAACTCTTCTTCTTCTTCTTACCAACAAGAAGATCTTATTCTTCCTCATCAAATTTATGACGACAACAACTTCTTCAACCAAATATATGATTCCTTGTTGTTTGACGAACAATCTCCGCCGCCATTGATGATGGATCATTATTCTTCTTCCTCGTACTACAGTAATAACACCAGCAGCAACCTTGATTCTTATTATCCTCCATTGTCGTTCATGGAAGAAGAGGAGCTTCAGAATTTGGAGATTGAAACGGCAACAAGGTGTAAAGTGGAGCCAGTAGTAACTGTAACTTGCTGTGATTCTGAGTCTCCTGCTGCGATTTTCAACGCAGATTCTGTCATGGGAAATAAGGAAATTAGAAAGAACAACAGGTCAACAAAGAAGGTTGTGGGTCAACCCTCCAAGAATCTTATGGCGGAAAGGAGAAGAAGAAAGAGACTTAATGATAGACTCTCAATGCTAAGAGCCATTGTCCCCAAGATTAGTAAGATGGATAGAACATCAATACTTGGAGACACCATTGATTACATGAAAGAGCTTCTAGAGAAGATCAACAATTTGCAACAAGAAGCTGTAAAAGTTGAAGATTCAAACATGGCAGGTGGCATTTTCAAAGATGTAATTAAACCAAATGAAATCTTGATTAGAAATTCACCCAAGTTTGAGGTTGAGAGGGATGTGGATAATACAAGGGTTGAGATTTGCTGTGCGGGGAAGCCAGGAATGTTGCTTTCAACAGTTAACACCTTGGAAGCATTAGGCCTTGACATTCAACAATGTGTTATAAGCTGTTTCAATGATTTCACAATGCACGTTTCTTGCTCAGAGGAACCAGAGCAAAGGGCAATGCTGAGTTCTGAAGATATAAAGCAAGCGTTATTTAGAAGTGCTGGATACGGAGGAAGATGCTTGTGA 1032 0.3953 MEIFYDDHHDFLEELMALRRETFMETNYNNTTTFHSSFPPNSSSSSYQQEDLILPHQIYDDNNFFNQIYDSLLFDEQSPPPLMMDHYSSSSYYSNNTSSNLDSYYPPLSFMEEEELQNLEIETATRCKVEPVVTVTCCDSESPAAIFNADSVMGNKEIRKNNRSTKKVVGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYMKELLEKINNLQQEAVKVEDSNMAGGIFKDVIKPNEILIRNSPKFEVERDVDNTRVEICCAGKPGMLLSTVNTLEALGLDIQQCVISCFNDFTMHVSCSEEPEQRAMLSSEDIKQALFRSAGYGGRCL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00821 343 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 219 IPR011598 GO:0046983
Adu08g00821 343 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 232 IPR036638 GO:0046983
Adu08g00821 343 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 15 343 - -
Adu08g00821 343 Coils Coil 209 236 - -
Adu08g00821 343 CDD ACT_UUR-ACR-like 269 332 - -
Adu08g00821 343 Gene3D - 178 249 IPR036638 GO:0046983
Adu08g00821 343 Pfam Helix-loop-helix DNA-binding domain 176 219 IPR011598 GO:0046983
Adu08g00821 343 PANTHER DNA BINDING PROTEIN 15 343 - -
Adu08g00821 343 SMART finulus 176 225 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00821 Adu-Chr8 15074194 15077182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00821 163 343 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 62.983 2.95e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu08g00821 HLH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00821 - - gmx:100812578 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00821 08 15074194 15077182 Adu08g00821 08 15074194 15077182 ECH