Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00819 ATGAGTCATGACCCTTATGTTCTTCATTCTGTTGTAAAATATTTTTTTTTTCAGGTTCTAGCAAGCAGAACGAAGATTTATATCATATTGGAGTTCATTACAGGTGGTGAATTGTTCGATAAAATTATACATCATGGACGTCTTAGCGAGACTGAAGCTAGAAGATATTTCCAACAGCTTATTGATGGCGTAGATTATTGCCACAGCAAGGGAGTCTATCACAGAGATTTGAAGCCAGAGAATCTTTTACTTGATTCACAAGGCAATATAAAAATTTCAGATTTTGGTTTAAGCGCATTACCAGAACAGGGTGTGAGTCTCCTTCGGACAACTTGTGGCACTCCAAACTATGTAGCCCCCGAGGTACTCAGTCACAAGGGTTACAATGGTGCTGTGGCAGATGTTTGGTCCTGTGGGGTTATCCTCTATGTCCTATTGGCTGGATACCTTCCCTTTGATGAGCTTGATCTAACCACCTTATACAGTAAGATTAATAAAGCAGACTTTTCATGCCCTTCTTGGTTTCCTGTAGGGGCAAAATCATTGATATGTAGAATTTTGGACACAAATCCTGAAACGCGTATAACCATAGAACAAATAAGAAACGATGAATGGTTTCAGAGGGGCTACGTTCCAGTCAGCCTTCAGGAGCATGAAGATGTAAATCTGGATGACATAAATGCTGCTTTTGATGATGCCGAGGAAGAGAGAGATATTCGTCAAAGCCATAATGAGGACATGGGTCCCTTATTGCTTAATGCATTTGACTTGATCATTCTATCTCAAGGCTTAAACCTTGCATCAATGTTTGACAAGGGACAGGGCGCTCTTAAGCATCACACACGTTTTATATCTCAAAAGCCAGCAAAGGTGGTTTTATCAAGTATGGAAGTTGTGGCCCAATCAATGGGATTTAAGACGCATATTCGCAACTTTAAGATGAGAATAGAGGGTGTCTCAGCAAATAAAACATCTTTTTTCTCGGTTATTCTGGAGGTTTTTGAGGTGGCTCCCACATTTTATATGGTGGACATTCAGAAAGCAGCTGGAGATGCTGGCGAATATCTCAATTTTTACAAGAGTTTTTGCGGCAATCTTGACGATATAATCTGGAAACCTTATAGAACATCAACTTCTCTCACAATTGAGAGTTATAGTGTTATAGATTATATGGGCTCTGGTGCATCTGTGATTTGGGTTCTTCTTGTGCTTCTTGGATGGATGGCCAGTATGCCGCTGGCTGCCGGCTTTGGCTTCGGCTTCCACGGAATTGATAACCAGAGATGTTTCGTGAACAATTCATTTCAACTTCACTACTAA 1320 0.4053 MSHDPYVLHSVVKYFFFQVLASRTKIYIILEFITGGELFDKIIHHGRLSETEARRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSLLRTTCGTPNYVAPEVLSHKGYNGAVADVWSCGVILYVLLAGYLPFDELDLTTLYSKINKADFSCPSWFPVGAKSLICRILDTNPETRITIEQIRNDEWFQRGYVPVSLQEHEDVNLDDINAAFDDAEEERDIRQSHNEDMGPLLLNAFDLIILSQGLNLASMFDKGQGALKHHTRFISQKPAKVVLSSMEVVAQSMGFKTHIRNFKMRIEGVSANKTSFFSVILEVFEVAPTFYMVDIQKAAGDAGEYLNFYKSFCGNLDDIIWKPYRTSTSLTIESYSVIDYMGSGASVIWVLLVLLGWMASMPLAAGFGFGFHGIDNQRCFVNNSFQLHY 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00819 439 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 378 - -
Adu08g00819 439 Gene3D Transferase(Phosphotransferase) domain 1 5 249 - -
Adu08g00819 439 ProSiteProfiles NAF domain profile. 247 271 IPR018451 GO:0007165
Adu08g00819 439 CDD CIPK_C 253 363 - -
Adu08g00819 439 Gene3D Kinase associated domain 1, KA1 250 372 - -
Adu08g00819 439 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00819 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 72 84 IPR008271 GO:0004672|GO:0006468
Adu08g00819 439 SUPERFAMILY Protein kinase-like (PK-like) 17 222 IPR011009 -
Adu08g00819 439 Pfam Protein kinase domain 17 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00819 439 Pfam NAF domain 250 307 IPR004041 GO:0007165
Adu08g00819 439 SMART serkin_6 6 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00819 439 PANTHER - 16 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00819 Adu-Chr8 15033942 15038768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00819 16 332 CBL-interacting serine-threonine protein kinases AT4G24400 79.180 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Adu08g00819 Pkinase 3.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00819 - - gmx:100785444 643.654