Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00800 ATGCCTCACAGAGCCACATACATTTTCCCGCGTCAATTTGGGGAGAGAGGGTTAGATGAGTCTTCGAAACAGCTATTGGATCACGAGAAGAAGAAGACACTTACCTCATGGGTCAAATCGGAACCATCCTTCGGGATCGAAAGCGACGCTACTTCCAAGAAGTCCAAAAACGACGTCGTTGAAGATGATGAAGATGTCGTTTACTCTAAAACACACTCCGCTGTGTCGGAGCTCTTCACCGCCGTTGGTGGCCGCCGTGAGAATCTCCGGAATAAGCAAAAGCATGTCGCCCGTGCGTTCCGTGACTGGCTGATCGAGAGAAAAGGAGATCGCCGATCCAGTCATGATCACCGGAGGTTCTCGTTGTCCGAGGAAGAAGACGAGTGCGGGCTTCTGCTTCCTCCGTCGGCGGCGAAGGACAGTGCCGGTGGAGCATTGGACCAGAGTTTTGACCGGCAGGTGTCGCTTCCCAGAATGTCTAGCGGGAGCAGCTACGCCGGGAGCTTGTTCTCCGGGACGGCAACGGCTACGACGGTGGACGGGAATTTCTTGAGCGAGGTCGTGAAGGAGGAAACGACGTCGTCTTCGACGTCGAGTAGGAGGAGGAGGCAACAGGAGGAGGTGGAGGAAGAAGATGAGAAAGAGAGGAGAGAGAAGGTTGCGGAAAAGTCGAAGGAGAGCTACATGCTGCAGGCTACAATGGCGAAGAGGCTCACTTGCTTGGCGAGTCTCGTGACTGAGCCCATTCTTGCTCCCACCACTGAGACATGGGATTCCGAATCCGTTTCCTATCGTCTATGGGTGAGTGGGTGTTTGTCATACTCAGACAAGATATCGGATGGATTTTACAACATACTGGGGATGAATCCGTACCTATGGGTGATGTGCAATGAGGTGGAGGAGGAAGGGAAAAAGATACCTAGTTTGATGGCGCTGAAGGCAATTGAACCCGGCGAGACGAGTATAGAGGTGGTTCTTGTTGATAGACAAGACGATTCTCGGTTGAAGGTACTTCAAGATAAAGCGCAGGAGTTGTATGGTGCTTCAGAGAATACTCTCGTGTTGGTTGAACAGCTTGGAAAACTTGTTGCCTCATATATGGGGGGTACATATCCGGTGGAGCAAGGAGATCTGCACAAGCGGTGGAAGATGATCAGCAGGAGGTTGAGGAATTTTCACAAGTGTGTTGTTCTTCCCATAGGCAGCTTATCTACTGGGCTTTGTAGGCATAGGGCCATTCTCTTCAAGAAATTGGCAGATTATATAGGTTTGCCATGCCGCATTGCTCGAGGTTGCAAGTATTGTGCTGCAGATCATAGATCCTCTTGCTTAGTCAAGTTCAAAGATGACAATCAGCTCTCAAGGGAATATGTAGTCGACCTGGTTGGGGAACCAGGAAATGTCCATGGGCCAGATTCCTCAATTAATGGAGCGTATCTTTCTTCAATGCCATCCCCATTTCAAATTTCTCATTTAAAAGAATCACAATCACCTTATATGGATGGCAGAACATGTTCACAATCTCCGAGTTCCAACCACATTTCTGTAATCCCTGAAAGTCATCCGTATTTAGGCTGTGAACAGGAAGATCAACAAATTAAAGAAGCTGAATTGCTAAAAAATCACAACAGCTCCATTTATTCTTCATTTGAGCAATCCCAAGAAGAAACAGTTCCACCTCCAATTCTTTTGGATTTAAACGAGAATAATAAGGCATGTGCAGTCCTGGACCCAATTTTGCCTTCCATCCATGAAGATGTTTCTAAAGCTCTTCATCCAGCTACTGAAGTAGCATTTCATGATTATGTTGGACTTGGCAAAGATGCAATTACTGTACAAGAAACTTACAAGAATGAGATCATTGTTACTGAAAGTTCTGTGGTAAAAACTAATTTTAAGCAATCTTTATTGTGCTCATCCAGCCAATCAGAACAGGTGCAGGTAGACAATGGAATCGAAAACCAGGGCTGTTTACCATCTGGGAATATTCCACGGTACCTGAATCTTGAGCCATCACTTGCAATGGACTGGCTTGAGATATCATGGGAGGAATTACGTATCAAAGAGCGTGTTGGTGCTGGTTCATTTGGGACAGTGCACCGTGCGGAATGGCATGGATCAGATGTTGCCGTCAAGGTTTTAACAGTTCAGGATTTCAGTGATGATAAATTAAAGGACTTTCTGAGAGAGGTTGCAATAATGAAACGGGTTCGCCATCCAAATGTGGTGCTCTTCATGGGTGCTGTTACAAAACGCCCCCATCTATCAATAGTGACAGAATATTTGCAAAGAGGTAGTTTATACCGACTGATACATAAGCCAACAGCTGGTGAACATTTGGATAGCAGGAGAAGATTACGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTTCATTGTCTAAAACCTCCTATCGTGCACTGGGATCTCAAATCTCCAAACTTGTTAGTGGACAAAAACTGGAACGTGAAGGTTTGCGATTTTGGGTTGTCTAGATTTAAGGCAAATACATTCATACCATCAAAGTCTGTTACTGGAACACCTGAATGGATGGCACCAGAGTTTCTCCGTGGAGAACCTTCAAATGAGAAATCTGATGTATACAGTTTTGGAGTTATCCTATGGGAGCTAGTAACCATGAAACAACCATGGATGGGACTTAGCCCTGCCCAGTAG 2679 0.4606 MPHRATYIFPRQFGERGLDESSKQLLDHEKKKTLTSWVKSEPSFGIESDATSKKSKNDVVEDDEDVVYSKTHSAVSELFTAVGGRRENLRNKQKHVARAFRDWLIERKGDRRSSHDHRRFSLSEEEDECGLLLPPSAAKDSAGGALDQSFDRQVSLPRMSSGSSYAGSLFSGTATATTVDGNFLSEVVKEETTSSSTSSRRRRQQEEVEEEDEKERREKVAEKSKESYMLQATMAKRLTCLASLVTEPILAPTTETWDSESVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNEVEEEGKKIPSLMALKAIEPGETSIEVVLVDRQDDSRLKVLQDKAQELYGASENTLVLVEQLGKLVASYMGGTYPVEQGDLHKRWKMISRRLRNFHKCVVLPIGSLSTGLCRHRAILFKKLADYIGLPCRIARGCKYCAADHRSSCLVKFKDDNQLSREYVVDLVGEPGNVHGPDSSINGAYLSSMPSPFQISHLKESQSPYMDGRTCSQSPSSNHISVIPESHPYLGCEQEDQQIKEAELLKNHNSSIYSSFEQSQEETVPPPILLDLNENNKACAVLDPILPSIHEDVSKALHPATEVAFHDYVGLGKDAITVQETYKNEIIVTESSVVKTNFKQSLLCSSSQSEQVQVDNGIENQGCLPSGNIPRYLNLEPSLAMDWLEISWEELRIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFSDDKLKDFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLQRGSLYRLIHKPTAGEHLDSRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWNVKVCDFGLSRFKANTFIPSKSVTGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMKQPWMGLSPAQ 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00800 892 Pfam Protein tyrosine and serine/threonine kinase 685 890 IPR001245 GO:0004672|GO:0006468
Adu08g00800 892 MobiDBLite consensus disorder prediction 187 223 - -
Adu08g00800 892 ProSiteProfiles Protein kinase domain profile. 685 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00800 892 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 151 892 - -
Adu08g00800 892 Gene3D Phosphorylase Kinase; domain 1 678 763 - -
Adu08g00800 892 Pfam Ethylene-responsive protein kinase Le-CTR1 259 468 - -
Adu08g00800 892 CDD STKc_MAP3K-like 691 892 - -
Adu08g00800 892 ProSitePatterns Protein kinases ATP-binding region signature. 691 712 IPR017441 GO:0005524
Adu08g00800 892 Gene3D Transferase(Phosphotransferase) domain 1 764 892 - -
Adu08g00800 892 SUPERFAMILY Protein kinase-like (PK-like) 664 891 IPR011009 -
Adu08g00800 892 MobiDBLite consensus disorder prediction 195 223 - -
Adu08g00800 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Adu08g00800 892 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 151 892 - -
Adu08g00800 892 Coils Coil 203 223 - -
Adu08g00800 892 SMART serkin_6 685 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00800 Adu-Chr8 14573388 14580896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00800 1 892 MAP Kinase Kinase Kinase AT4G24480 54.624 0.0 928
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Adu08g00800 EDR1 8.7e-76 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00800 - - adu:107461056 1681.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01991 07 64409362 64415375 Adu08g00800 08 14573388 14580896 PCT
Adu07g00375 07 3548260 3552396 Adu08g00800 08 14573388 14580896 PCT