Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00795 ATGATGAAGAAGGGGGTTGGAGATCCCCTATTTGATGTCTTCTTCATCACTCGGCGCCCATCCTCCGTCGGATTCTTCCTGCTGCTCGCGGTCATCTTGTCGCCGTCGTCTCGGCGTCATTATCTCGATGGTCAGTGGCAGATCCCCTATTTGATGTCTTCTTCATCACTCGGCGCCCATCCTCCGTCGGATTCTTTCTGCTGCTCGCGGTCTTCTTGTCGCCGTCGTCTCGGCGACATTATTTCGAAGTGGCAGGTAGCAATGGCAGCTAGGTATGATCTCATCAAGTGTATCAATGCTGGTCCAGCGCATAAGGTGTGGAAGCTCAAAGTACGTGTCATTAGACTTTGGACCGTTTCTCAATTTGCAAGATCTGGGATGAAGGCACCTATTGAGATGGTTGTCCTTGATGAAGAGGGAGATACAATTCAATGCACTGTAAAAGACATATTTGTTCCTATCTTCGAGGGCTTACTCGCTGAGGGCAACGTGTACGTGGTCACTAATTTTGGAGTTGCTTTGAATACTATCAAGTTCAAGCCTACTAGACACGAATTTAGGATCCATTTCAAGAGGAACACGATTGTGCGTCCGGTACAAGATTCTTCAGTTCCATTGAACGGATTCAATTTTGTTCCGTTCAAAACAATTCAATCAGAGTCTAAAGAAGATGGTTATTTAGTTGATGTGATAGGTCAGGTTGCTTCTAAGGGTAACTTGGTCGAATTCACACGGGACGGGAAGCTGTCAAGTTATATCACCATAGAACTTGATGATCTTGAGTACATCATCCACATAAGGGTGATAGACCACACCGATGCTGCCTCTTTTGTTTTGTTTGATGGAGAAGCTGCAAAATTTCTTGGAGTTTCTGCTAAGGACCTTAGGCAGTCTTGTGGTGTTGAGAAAAATTCCTGTCCCGAAGAGATTAATAAGCTTAGGGATATTAAGTTCATCTTCAAAGTGCAACTCAAGATGAGGAATCTGAACTCTTATGAACCATATGTGATTCATGTACTGAGAATGACTAATGAGAACTCTCTGGTCTCTACCTTCCTGGATAAATACCATCCTGACACTGGCCTTTTGTCCCATAAAAATTCTGAACTATTGAGTTTGTCTACTGGTCCATACGACACTTCTAAGGCTTGTGAGAGTGAGCCAACTCCATCACCTGCAGTTGATGAGAAACATAATTCTAAGATTCTCGGAGCTAAGAAACATATGGAAGAGATTGGAGAGGAGTCAGTTTCATCCAAATCTAAGAAAGGGAAGTGGGTTGTGGTGGAGGACTAA 1296 0.4406 MMKKGVGDPLFDVFFITRRPSSVGFFLLLAVILSPSSRRHYLDGQWQIPYLMSSSSLGAHPPSDSFCCSRSSCRRRLGDIISKWQVAMAARYDLIKCINAGPAHKVWKLKVRVIRLWTVSQFARSGMKAPIEMVVLDEEGDTIQCTVKDIFVPIFEGLLAEGNVYVVTNFGVALNTIKFKPTRHEFRIHFKRNTIVRPVQDSSVPLNGFNFVPFKTIQSESKEDGYLVDVIGQVASKGNLVEFTRDGKLSSYITIELDDLEYIIHIRVIDHTDAASFVLFDGEAAKFLGVSAKDLRQSCGVEKNSCPEEINKLRDIKFIFKVQLKMRNLNSYEPYVIHVLRMTNENSLVSTFLDKYHPDTGLLSHKNSELLSLSTGPYDTSKACESEPTPSPAVDEKHNSKILGAKKHMEEIGEESVSSKSKKGKWVVVED 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00795 431 SUPERFAMILY Nucleic acid-binding proteins 209 261 IPR012340 -
Adu08g00795 431 MobiDBLite consensus disorder prediction 391 431 - -
Adu08g00795 431 PANTHER REPLICATION FACTOR A 1, RFA1 118 244 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu08g00795 431 PANTHER REPLICATION FACTOR A 1, RFA1 262 355 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu08g00795 431 Pfam Replication factor-A C terminal domain 259 332 IPR013955 -
Adu08g00795 431 MobiDBLite consensus disorder prediction 379 431 - -
Adu08g00795 431 PANTHER BNAC07G49340D PROTEIN 118 244 - -
Adu08g00795 431 PANTHER BNAC07G49340D PROTEIN 262 355 - -
Adu08g00795 431 Gene3D - 95 202 IPR012340 -
Adu08g00795 431 SUPERFAMILY Nucleic acid-binding proteins 261 343 IPR012340 -
Adu08g00795 431 CDD RPA1_DBD_A_like 108 196 - -
Adu08g00795 431 Pfam Domain of unknown function DUF223 132 222 IPR003871 -
Adu08g00795 431 SUPERFAMILY Nucleic acid-binding proteins 102 201 IPR012340 -
Adu08g00795 431 Gene3D - 251 353 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00795 Adu-Chr8 14516406 14522191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00795 78 236 Core DNA Replication Machinery Family AT5G08020 25.309 1.12e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00795 - - adu:107477146 343.969