Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00792 ATGCCGGAGAAGTCCAGGAAGGTACCTTTTACGGAACAAGACTCAGCAAAGCTCCTAGAAAGGTATGATGCAACGACGGTGTTAACTTTGCTTCAGGAACTTGCGCACTATCCTCACGCGAAGATCGATTGGAATGAGTTGGTGAAGAATACATCAACTGGCATTTCCACCGCCAGAGAGTATCAGATGGTGTGGCGCCACTTAGCCTACCGTCATGCCCTTGCTGAAAATCTTGAAGATGGTGCTCAACCTCTGGATGATGATAGTGACCTAGAGTGCGAGCTGGAAGTATCGCCTCCAGTAAGTGCTGAAGCTGTGTCAGAGGCTGCAGCATGTATGAAGGTAATGATTGCATCTCGTACGCTGAGTGAATCAACCCCTAGTAGCTCAACGATTGAGGCTCCATTGACTATAACTGTTCCGGTTTGCCGTGGATCTGGAACTCCTAGTGGAAGTTCACAATCATCTAAATTGATGCAAGGGACAAATGTTATTTTTCCGGTTACTGTTCAGAGACAAACACTGCCAACTGCACCATCAACAGATGGTGTTGAGACCAAGGGATTAGGTGGTGGCAACATGGCTTCCAAAAGGAAGAGAAAAGCATGGTCAGAGGAAGAGGACATCCAGTTACGAGCAGCTGTTCAGAGATTTGGTGAAGGAAATTGGGCTAACATGGCCAAAGGAGATAACTTTCCTATTAAGAGAAGTCCTACTCAATTGGCTCAGAGGTGGAGCATTTTAAGAAAGAAAGATGGAACTGCCAATTCGGGAACCATCGTGACCAGCACAACTTATACTACTGCCGAACAACTGGCAACTCGTCATTCATTATCTTTAGCCCTTGATATGCCATTCAAGAAGTTAACTGCTCCTGGAACTGCTGATCAAGCTAAGACATCCTTAACAAGTAAAACCCAAGTGCAACATACCACTACAGCAACAACAATACAAAGTAGTTTACCACCACATCAGCAATCAATGCTCAGAGGTAATCCAACTCCAAATCCTGCATTAAAAGCTACTGCGGTTGCACAAGTAAGAAATGCTGTGCCTGGAACAAGTATTTCATTGGCAAAACCATCCACTTCTGCTGGTATGTCTTCAGAATCGGAGGTACAAGCTCGCACTAGTTCAAGTGTTGCACATGTTCCCCCTCAGTCTGTACGCATTCCATCTCAGTCTGCACCTGCACCCTCCCAGTCAACTGCTCCCATCACATCTCCGTTATCATGCTCTAGTACCGTTAAAGCCGCCTCTTCTACGGTACCTGTATTGCCTGAGAAGGACAAACCCGTTACCCCTACCCTTGTGGTTAACAAAGTTCCAATAAAGCAAGAAGTTAATACTACAGATGAATTGCGAAATTCAAAGCCTAGCCCGGCACCAAAAGAGATGGTTCAAAATGATGAGAAATCAACTCAAGACAAGAGCATGAATATTCCCGTTAGAGAGAGGGTTACTTCTCTTGTGGGAAGTACAAGAAAGGAGGAAGTAGCAGAAGATAAAGCAGTGCCAAAAAATCAAGTCAAGTCTGAAGATGATGGAAACAAGGGGAGCCATGAGTTAGATAAAGAAAAGAGCAAAATTTCAATTAATGGAAGATCTCAGGATCAAAAGATGGATGAGAAGCAAGAAAATTTGCAGAACTAG 1653 0.4453 MPEKSRKVPFTEQDSAKLLERYDATTVLTLLQELAHYPHAKIDWNELVKNTSTGISTAREYQMVWRHLAYRHALAENLEDGAQPLDDDSDLECELEVSPPVSAEAVSEAAACMKVMIASRTLSESTPSSSTIEAPLTITVPVCRGSGTPSGSSQSSKLMQGTNVIFPVTVQRQTLPTAPSTDGVETKGLGGGNMASKRKRKAWSEEEDIQLRAAVQRFGEGNWANMAKGDNFPIKRSPTQLAQRWSILRKKDGTANSGTIVTSTTYTTAEQLATRHSLSLALDMPFKKLTAPGTADQAKTSLTSKTQVQHTTTATTIQSSLPPHQQSMLRGNPTPNPALKATAVAQVRNAVPGTSISLAKPSTSAGMSSESEVQARTSSSVAHVPPQSVRIPSQSAPAPSQSTAPITSPLSCSSTVKAASSTVPVLPEKDKPVTPTLVVNKVPIKQEVNTTDELRNSKPSPAPKEMVQNDEKSTQDKSMNIPVRERVTSLVGSTRKEEVAEDKAVPKNQVKSEDDGNKGSHELDKEKSKISINGRSQDQKMDEKQENLQN 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00792 550 Pfam Myb-like DNA-binding domain 200 245 IPR001005 -
Adu08g00792 550 MobiDBLite consensus disorder prediction 314 333 - -
Adu08g00792 550 ProSiteProfiles Myb-like domain profile. 195 249 IPR001005 -
Adu08g00792 550 MobiDBLite consensus disorder prediction 490 550 - -
Adu08g00792 550 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 341 - -
Adu08g00792 550 MobiDBLite consensus disorder prediction 314 338 - -
Adu08g00792 550 Gene3D - 193 255 - -
Adu08g00792 550 MobiDBLite consensus disorder prediction 355 411 - -
Adu08g00792 550 CDD SANT_TRF 201 250 - -
Adu08g00792 550 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 341 - -
Adu08g00792 550 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 253 IPR017930 -
Adu08g00792 550 SUPERFAMILY Homeodomain-like 198 251 IPR009057 -
Adu08g00792 550 MobiDBLite consensus disorder prediction 448 550 - -
Adu08g00792 550 SMART sant 199 251 IPR001005 -
Adu08g00792 550 MobiDBLite consensus disorder prediction 176 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00792 Adu-Chr8 14470956 14475809 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu08g00792 Myb_DNA-binding 2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00792 - - adu:107460964 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00792 08 14470956 14475809 Adu08g00792 08 14470956 14475809 ECH