Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00784 ATGATGTTGTGCTCATTCCATCATCATCACCTTTGGCTTCAGTTCCATTCAACAATGGCCTATTCGGGTTCACATAGGCTACATAGCAATATCGAAAGCTGCGGTTTTTGTCATAAGCCCATGTGTGCAGATCGATTATGTTTTGTAAATATCAATCATTCGCCAGAGTGTTTGAGGCGGGATTCTTCTGCACTTATCCTATCCAGAGTACATGTCCCACTTAGGCCCTTACGATGTGTTTCGGTGTGCCAGTCCACACTAATACCAGCTGGAGGGTGTGAGGCTCCACTCAGGAATTTGGCTACTATTTCTTTACCAAGGCCACAGTGCACTATATCAGGAAAACCCATTGTACAATTTGTACATCAATTCATCCCTGCCCTTGGTATCATTGGTTTTGCTGTCTGGGGTCTAGAGCCACTTCTGTGCCTGAGCAGGACTCTATTTCTGCAAAAGACTGACAAAAGTTGGAAGAAAAGTAGTTTGCGTTATTTAATGAAATCTTATCTTCAACCTTTGCTGCTATGGACAGGGGTTATGCTCATATGCAGGGATTTAGATCCATTAGTCTTACCATCAGAAACCAGTCAGGCTGTGAAGCAACGGCTGCTGAGTTTTGTAAGATCCTTGTCAACAGTCCTTACATTTGCTTATTGTTCTTCAAGCTTAATTAAGCAAGCACAAAAAAGTTGTATGGAGATGAATGACTCCAGTGATGAAAGGAATATGAGGATTGATTTTACTGGTAAAGCTGTATATACTGCAATATGGGTAGCTGCTGTGTCACTGTTCATGGAGTTGCTGGGATTCTCCACACAGAAATGGTTGACTGCTGGTGGTTTGGGCACAGTATTGCTTTCGCTTGCAGGTCGTGAGATATTCATGAACTTCCTTTCAAGTATAATGATTCATACAACTCGACCATTTGTTGTGAATGAGCGGATTAAAACAAAGATTAAAGATGATGAGGTTTCTGGTAGAGTTGAGCATGTAGGCTGGTGGTCACCAACAATTGTTAGAGGTGCTGATTGTGAAGCAGTACATATTCCTAACCAGAAGTTGAGTGTAAACATTGTAAGGAATCTTAGTAAGAAATCTCATTGGCGCATCAAGACTCACCTTGCCATCAGTCACTTGGATGTTAACAAGATCAATAATATCCTAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAATAGAGCAGAAAAGATTGCATAGAAGGGTTTTTCTGGAGGATATCAATCCAGAAAATCAGGCTCTTATGGAGGCTATTCTCTTGGATCTTCTCAGAGTTATCGATCATCATGGAGCTCGACTAGCGACCCCTATCCGCACAATTCAGAAGATGTACAGTGTCACTGATTCAGAAGCCGATCCATTTGATGAGAACCTATTCACTCGTTCCAGAGCTAAGGCTAACCGTCCATTCTCATCAAAGGATTCACCTTACAATGTTAAGCCTTCAATTCATTCGAACATTACAAACGAGAAGGATAACAAGTTTGAGGAAACCTTGACATCTGACTTGAGAGTAGATGACGACTTTGCAGGGCCATCAACCTCCACATCCAGCGTAAACTCCAGCAACGAGAAATTTAACCCTTCTGAATCCAAAACCAAGAATATGGATCATGATAATTTGGTCCAGAAGACATCCAAATCCATGCAGCCCAAGGAAAAAGCAGGAAGTGCAGGAAACAAGACATCACCGGAATTTTTGTTGACTTCCAAGAAGTCAGGCAGAGGAGATGCTACTAATTCTGTTACCTCTTCACCATCAAAGAAAGGTGAAGAAAAAGATAAATCTGGTGGCTCATCATCATCAACTATTCCTTCCTTGAAAGAGAATATTGTTCTTGATGCTGCCTTGCTGGGAGCGAAACGGACACTTGAAATAGACGACAAAGTTAGTCCACCTATCCCTGCAGAGCCTCCAGAATTCGCTATCCAGCAGAAAGGATGTGAACCTCGTGGAATTAAGGATCACAAGGGTTGTAAGAAGTCTCCTAATGCTAAGCAGAGTGATTAG 2034 0.4204 MMLCSFHHHHLWLQFHSTMAYSGSHRLHSNIESCGFCHKPMCADRLCFVNINHSPECLRRDSSALILSRVHVPLRPLRCVSVCQSTLIPAGGCEAPLRNLATISLPRPQCTISGKPIVQFVHQFIPALGIIGFAVWGLEPLLCLSRTLFLQKTDKSWKKSSLRYLMKSYLQPLLLWTGVMLICRDLDPLVLPSETSQAVKQRLLSFVRSLSTVLTFAYCSSSLIKQAQKSCMEMNDSSDERNMRIDFTGKAVYTAIWVAAVSLFMELLGFSTQKWLTAGGLGTVLLSLAGREIFMNFLSSIMIHTTRPFVVNERIKTKIKDDEVSGRVEHVGWWSPTIVRGADCEAVHIPNQKLSVNIVRNLSKKSHWRIKTHLAISHLDVNKINNILADMRKVLAKNPQIEQKRLHRRVFLEDINPENQALMEAILLDLLRVIDHHGARLATPIRTIQKMYSVTDSEADPFDENLFTRSRAKANRPFSSKDSPYNVKPSIHSNITNEKDNKFEETLTSDLRVDDDFAGPSTSTSSVNSSNEKFNPSESKTKNMDHDNLVQKTSKSMQPKEKAGSAGNKTSPEFLLTSKKSGRGDATNSVTSSPSKKGEEKDKSGGSSSSTIPSLKENIVLDAALLGAKRTLEIDDKVSPPIPAEPPEFAIQQKGCEPRGIKDHKGCKKSPNAKQSD 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00784 677 Gene3D - 202 307 - -
Adu08g00784 677 MobiDBLite consensus disorder prediction 657 671 - -
Adu08g00784 677 MobiDBLite consensus disorder prediction 518 537 - -
Adu08g00784 677 MobiDBLite consensus disorder prediction 495 512 - -
Adu08g00784 677 SUPERFAMILY Sm-like ribonucleoproteins 293 363 IPR010920 -
Adu08g00784 677 MobiDBLite consensus disorder prediction 473 494 - -
Adu08g00784 677 MobiDBLite consensus disorder prediction 550 594 - -
Adu08g00784 677 MobiDBLite consensus disorder prediction 637 677 - -
Adu08g00784 677 MobiDBLite consensus disorder prediction 473 618 - -
Adu08g00784 677 Gene3D - 308 361 IPR023408 -
Adu08g00784 677 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 19 574 IPR045042 -
Adu08g00784 677 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 19 574 - -
Adu08g00784 677 Pfam Mechanosensitive ion channel 250 407 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00784 Adu-Chr8 14337789 14344011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00784 25 637 Mechanosensitive Ion Channel Family AT1G58200 47.568 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00784 K22047 - gmx:100797302 774.622