Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00779 ATGGCTTCTTCTTCTTTTTCATTCTTCTCGTTTTTAATAACATTCACTTTTCTTCTACTTGCTAACCTCAGCACTGTTGCATATGCAGTGGCTAATCAAACTAGAGAAACGCCGCCGCCGCCACCGCCACCACCGCCGCCGGATTCCCAAAGAACTTCATCCGCCTTCAAACCAGGCATGGCGGTGGTAGTTGGCATATTAACCACCATGTTCTCTCTCACCTTCCTCCTCCTCCTCTACATCAAGCACTGCAACGGCGGCGCCACCGACTCCACCGGAGCTACCGGAACCCGCTACAATTACACCTCACGCGCGGCAACGTTCGCTGGAAGAAAAAACTCCGGCATCGACCGTTCCATAGTGGAATCGCTTCCAATCTTCAGATTCGGGTCCCTCCGAGGACAAAAAGAAGGACTCGATTGCGCGATTTGTCTCGCAAAATTCGAGTCCTCTGAGGTCCTCCGGCTCCTCCCGAAATGCAAGCACGCGTTCCACGTGGAGTGCGTGGACACGTGGCTTGACGCGCACTCCACGTGTCCTTTGTGCCGGCATCGAGTGGATCCGGAGGACATTCTTCTGGTGGAAGACAACAATGCAGCCGCACCGGTGCACCCTCAGAGCGAGAACGAAGCGTGTTCGGAGAGGTACGAAACACGGCGAGTCTCCGGAAGGCATTCGTGGGTTGGTGAGAAAGAAGGAGGGTTCTTGGAGATCATTGTTGAGAACGAGAACGAAACAGAACGACGAAACGCAGCGCCAACGTCGTCGTTTAGGAGGTCGCTTGATAGTGCCACGTGTGCAACGACATCGAAATCGAATAATAATAATAATAACAAGAAGTGGTTAATGCGTCCAAGAAAAGACGGGATGCTGTTGGTGAAAACGACGACGCATCAGGAAGCGGAGAAAGAGAAAGAAAGGAGGAGCACCGGTGCGGAACGGAGGTTGGAGCACAGGATAATTGTCTCTCCTACCCCTAAACAATGCGGTTACGATTATAATGGTTTGTTGCGAGGGCAGTTACAACGGTGGAGCGATGTTCAGCCGTCGGATCTACTTTACCTGACATCGGAGATGATAATAAGTAAGCATAATAACGGTAGTGGTGCTGAAATCGGGGGCAATTTGGTAATTAACACGAGGAGTATGTCTGAGATAACGGGATTGAGCAGGTTTGTGAGGAACGGTAACGGTAACGGTAGTAACAGGGAAGAAGAACAAGGAGGAGGAAGAAGAAGAGAAGAGGGGGTTGTTACGAGGTGGCTGGGATGGATATCAAGGACGCAGACACAGCCAGCTGTACGTAAGAATGAAAGATACAAGATAATAACTAAGTCCCTAACTTTTCCCCTTCTACTATCTTTGCCTCCACACCCATTCAACCCCTCTTCGTCACTGTCGGTTTGCCACCACCTCTGGTCTCGCCGTCGAACGGGTGATCGTGGTCAATCTCCACACTTCCGGTTGTCGCTATTGTGGGTTCACTCTCAATCTCAGTATCTTCTCCACACCTCGTCGCCGCCGTGGCTGTTCGTCGTCATCCTCGTCACTCTCAATCTCAACTTATGCTGCTCGTTACTGTGGGTATTCGTTGTCGCTTTCTACTCTTCTGTGTTCACTGTCGTGGGTGTTTGTCACCGCTCCTTGCTCACCCATGCTCGCTACTGTGTTCATCACCTCTCCGGTCGCCATTTGCCTCCTCTATTCAAGTAA 1713 0.5108 MASSSFSFFSFLITFTFLLLANLSTVAYAVANQTRETPPPPPPPPPPDSQRTSSAFKPGMAVVVGILTTMFSLTFLLLLYIKHCNGGATDSTGATGTRYNYTSRAATFAGRKNSGIDRSIVESLPIFRFGSLRGQKEGLDCAICLAKFESSEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRHRVDPEDILLVEDNNAAAPVHPQSENEACSERYETRRVSGRHSWVGEKEGGFLEIIVENENETERRNAAPTSSFRRSLDSATCATTSKSNNNNNNKKWLMRPRKDGMLLVKTTTHQEAEKEKERRSTGAERRLEHRIIVSPTPKQCGYDYNGLLRGQLQRWSDVQPSDLLYLTSEMIISKHNNGSGAEIGGNLVINTRSMSEITGLSRFVRNGNGNGSNREEEQGGGRRREEGVVTRWLGWISRTQTQPAVRKNERYKIITKSLTFPLLLSLPPHPFNPSSSLSVCHHLWSRRRTGDRGQSPHFRLSLLWVHSQSQYLLHTSSPPWLFVVILVTLNLNLCCSLLWVFVVAFYSSVFTVVGVCHRSLLTHARYCVHHLSGRHLPPLFK 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00779 570 MobiDBLite consensus disorder prediction 249 280 - -
Adu08g00779 570 MobiDBLite consensus disorder prediction 246 287 - -
Adu08g00779 570 PANTHER RING-H2 FINGER PROTEIN ATL43 32 430 - -
Adu08g00779 570 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 32 430 - -
Adu08g00779 570 MobiDBLite consensus disorder prediction 35 51 - -
Adu08g00779 570 MobiDBLite consensus disorder prediction 392 413 - -
Adu08g00779 570 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 190 IPR013083 -
Adu08g00779 570 SUPERFAMILY RING/U-box 126 188 - -
Adu08g00779 570 CDD RING-H2_EL5_like 140 183 - -
Adu08g00779 570 ProSiteProfiles Zinc finger RING-type profile. 141 183 IPR001841 -
Adu08g00779 570 SMART ring_2 141 182 IPR001841 -
Adu08g00779 570 MobiDBLite consensus disorder prediction 33 54 - -
Adu08g00779 570 Pfam Ring finger domain 140 183 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00779 Adu-Chr8 14203015 14207004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00779 53 434 C3H Transcription Factor Family AT5G05810 44.750 5.35e-80 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00779 K19041 - twl:119999828 314.309