Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00763 ATGAGATTGGGTGCTGCAGAGGAATTTTATCCCCAAAGACCTGGTGAGGCTTATTGTATCTACTATTTGAGGACTGGATTCTGTGGCTATGGTTCCCGCTACCGTTTCAACCATTCCTGTGACCGGGCCGATATCTGGTTTCATTGTGTCCGCCCAATGGATCAGTACGGCCGATTGAGCGAGGGTTTCCGGTCTGATCCAGCGAGTGTTGAGGCTGTTGGTGTTGTTGCTAGGGCTAGAGGATAA 246 0.5041 MRLGAAEEFYPQRPGEAYCIYYLRTGFCGYGSRYRFNHSCDRADIWFHCVRPMDQYGRLSEGFRSDPASVEAVGVVARARG 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00763 81 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 15 39 IPR000571 GO:0046872
Adu08g00763 81 ProSiteProfiles Zinc finger C3H1-type profile. 13 41 IPR000571 GO:0046872
Adu08g00763 81 PANTHER TRANSCRIPTION FACTOR C3H FAMILY-RELATED 4 44 - -
Adu08g00763 81 PANTHER PROTEIN PHOSPHATASE RELATED 4 44 - -
Adu08g00763 81 SUPERFAMILY CCCH zinc finger 13 44 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00763 Adu-Chr8 13730878 13731382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00763 8 45 C2H2 Transcription Factor Family AT5G18550 65.789 5.91e-12 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Adu08g00763 zf-CCCH 2.9e-05 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00763 - - csin:114302989 70.4774