Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00761 ATGGAATTTGACGAGCACGAAGACCAAGAGGAAGAGGAAATGGGGATCCCGGAGCCGCCGCCTGCGCCGCAGGGTTATGACTCGTTTGGAAACTCGGCGGCGAGGTCCAAATCAGAAGGAGGAGGAGGAGGAGCTGCCGCCGTGACACCTGGTCGGAAAGGTGGAACCGCCGTCAGGTACAGAGAATGTCAGAAGAATCACGCGGTCAGTATCGGCGGCCACGCCGTTGACGGTTGCTGCGAGTTTCTAGCCGCCGGAGGGGAAGGAACACTGGAGGCCCACCGGCCTCTAGCTCTTCCAGCAGCCGCATCAGGCGGCGGTGGATTCTACAAAGAGGAAGAAGACATGTCAAACCCTAGCAGCAGCGGCGGCGGCGGCGGCGGTAGCGGAAGCGGAACAAAGAAGAGGTTTAGAACGAAATTCACACAGGAGCAGAAGGATAAGATGCTTGCATTCGCAGAGCAGTTAGGGTGGAGAATCCAGAAGCATGATGAATCTGCAGTTGAGAATTTCTGCGCTGAAACCGGTGTTAAGAGACATGTTCTCAAGGTTTGGATGCATAACAATAAGCACACTCTCGAAGAGTATGGAGGTGAACGTGTATGGCATGCAGAGAAAAGCAGTGTTATCTTCTCCTGA 639 0.5477 MEFDEHEDQEEEEMGIPEPPPAPQGYDSFGNSAARSKSEGGGGGAAAVTPGRKGGTAVRYRECQKNHAVSIGGHAVDGCCEFLAAGGEGTLEAHRPLALPAAASGGGGFYKEEEDMSNPSSSGGGGGGSGSGTKKRFRTKFTQEQKDKMLAFAEQLGWRIQKHDESAVENFCAETGVKRHVLKVWMHNNKHTLEEYGGERVWHAEKSSVIFS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00761 212 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 118 193 - -
Adu08g00761 212 Gene3D - 119 195 - -
Adu08g00761 212 Pfam ZF-HD protein dimerisation region 58 93 IPR006456 -
Adu08g00761 212 MobiDBLite consensus disorder prediction 1 15 - -
Adu08g00761 212 SUPERFAMILY Homeodomain-like 120 193 IPR009057 -
Adu08g00761 212 MobiDBLite consensus disorder prediction 1 53 - -
Adu08g00761 212 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 60 113 IPR006456 -
Adu08g00761 212 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 118 193 - -
Adu08g00761 212 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 32 96 - -
Adu08g00761 212 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 134 190 IPR006455 -
Adu08g00761 212 MobiDBLite consensus disorder prediction 109 135 - -
Adu08g00761 212 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 32 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00761 Adu-Chr8 13696158 13697757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00761 7 196 ZF-HD Transcription Factor Family AT4G24660 48.069 1.02e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Adu08g00761 ZF-HD_dimer 9.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00761 - - twl:120009154 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00761 08 13696158 13697757 Adu08g00761 08 13696158 13697757 ECH
Adu07g01953 07 62417421 62419557 Adu08g00761 08 13696158 13697757 PCT