Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00740 ATGGCACTAGAGGCTGTGGTTTTTCCACAAGACCCATTATTCTCATCATATGCTTCTTCTACCACCACCACCAAGGATTATTTCTACTCATCCTTTCTCGGCAGCCACCACCACGATCTCATCGGAATTATAAACAACAACATCATTCAACAAAACCAAGCAACTAACAATTCCGACTCTTCTTCTCCTCCTTCCAACAACGACCACTACGCCACTTCTTCCAGCTCCCCTGACTGCTGCGCTGCCACCGTCGATCAACCTTCTCTCCCCACCACCACTGGCCGCCGCAAACGCCGCCGCACCAAAACCACGAAGAACAAGGAGGACATCGAGAACCAGAGGATGACTCACATTGCTGTTGAACGCAACCGCCGCAAACAGATGAACGACTACCTCGCCGTCCTTCGTTCTTTGATGCCTCCTTCTTATGTTCAAAGAGGTGACCAAGCGTCTATTATTGGAGGCGCCATTAACTTTGTGAAGGAGCTAGAGCAGCTTTTGCAGTCCATGGAGGGTCAAAAGAAACCCAACCACCACGACACTACTGCTGCTGGTGGCGCCGCCGGAATGAATAGTAGTGGCCAATCATCGCCGTTTGGCGAATTCTTCGCGTTTCCGCAGTACACAACGCGTGGTCATCATCAGGGAAAGACGATGGCAGCGGAGCAGCAACAGAAACAGTGGGCGGCGGCGGTGGCGGACATAGAAGTGACAATGGTGGACAGCCATGCGAACCTCAAGATTCTATCAAAGAAACGACATGGGCAGCTGATGAAGATGGTTGTTGGTCTCCAATCTCTAAGCCTCACCATTCTCCACCTTAATGTTACCACTCTCCATGACTTCGTCCTTTACTCTGTTAGCGTAAAGGCAGAGGATGGGTGCCAGCTGAATACGGTGGATGAAATAGCTGCTGCTGTGAATCAACTATTATGCGCAGTTCAACAAGAGGCATCATCTTTCAACCAAATTAATTAG 978 0.499 MALEAVVFPQDPLFSSYASSTTTTKDYFYSSFLGSHHHDLIGIINNNIIQQNQATNNSDSSSPPSNNDHYATSSSSPDCCAATVDQPSLPTTTGRRKRRRTKTTKNKEDIENQRMTHIAVERNRRKQMNDYLAVLRSLMPPSYVQRGDQASIIGGAINFVKELEQLLQSMEGQKKPNHHDTTAAGGAAGMNSSGQSSPFGEFFAFPQYTTRGHHQGKTMAAEQQQKQWAAAVADIEVTMVDSHANLKILSKKRHGQLMKMVVGLQSLSLTILHLNVTTLHDFVLYSVSVKAEDGCQLNTVDEIAAAVNQLLCAVQQEASSFNQIN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00740 325 CDD bHLH_AtFAMA_like 115 183 - -
Adu08g00740 325 PANTHER MAX DIMERIZATION, MAD 1 319 - -
Adu08g00740 325 Gene3D - 101 179 IPR036638 GO:0046983
Adu08g00740 325 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 1 319 - -
Adu08g00740 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 112 163 IPR011598 GO:0046983
Adu08g00740 325 MobiDBLite consensus disorder prediction 171 194 - -
Adu08g00740 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 112 179 IPR036638 GO:0046983
Adu08g00740 325 MobiDBLite consensus disorder prediction 53 91 - -
Adu08g00740 325 MobiDBLite consensus disorder prediction 53 107 - -
Adu08g00740 325 Pfam Helix-loop-helix DNA-binding domain 113 164 IPR011598 GO:0046983
Adu08g00740 325 SMART finulus 118 169 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00740 Adu-Chr8 13360299 13362261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00740 1 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 50.485 2.03e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu08g00740 HLH 3.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00740 - - gmx:100789380 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00740 08 13360299 13362261 Adu08g00740 08 13360299 13362261 ECH
Adu07g01930 07 61303646 61306692 Adu08g00740 08 13360299 13362261 PCT