Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00722 ATGTTTCTCCTGTCTTCCATTGATGCTTCTAAGTTAACATTCATTATCCATTTTCCTTTTTGTTTTGGTTTGTACTTTTATGCTTACATATTCCGAGTTGGGTATCATGAATGCAGTGAGAATCTGCCAGACAAATACAAAGAGTATCAACCACGACCACTATACTTTGATGGGTTCAACTCTTTATTTTTGTACAGGAGATTATACCGATGTCATACCACATTGGAATCATTTCATGCAGATGATGGAAATGTGGAAAGAAGGAAAGACCTATCCTTGAAGGATTTCTATGACCAGTTTGATGCAAAGAAACCGGTTATGCTTACTGGATTGGTTGAGACATGGCCTGCCAGACATAAATGGACAACTGATCAGTTGTTGCAAAACTATGGAGACGTAGCATTTAAAATTTCCCAAAGGAGTTCTCGGAAGGTCTCCATGAAATTCAAGGATTATGTCTCATACATGGAAGTTCAACATGATGAAGATCCCTTATATATTTTTGATGAAAAGTTTGGTGAAGTTGCACCTAGCTTATTGAAGGATTATTCTGTACCTCATCTTTTTCAAGAAGATTTCTTTGATATCTTAGATGCTGAACAAAGACCATCCTATAGGTGGCTAATAATTGGACCACAGAGATCTGGGGCCTCTTGGCACGTTGATCCAGCTCTTACTAGTGCATGGAATACTCTTCTTTCTGGCCGTAAAAGGTGGGCATTATATCCTCCAGGAAAGGTGCCTTTGGGTGTGACAGTGCATGTTAATGAAGAAGATGGTGATGTCAATATTGAGACCCCGTCATCACTTCAGTGGTGGCTGGACTATTATCCTCTCCTTCCTGATGAAGACAAGCCAATTGAGTGTACACAACTACCAGGAGAGACAATTTATGTTCCAAGTGGATGGTGGCACTGTGTTTTAAATTTAGAAACAACTATCGCTGTCACTCAGAATTATGTGAATTCAAATAATTTTGAATTTGTATGTTTGGACATGGCTCCTGGTTATCGTCATAAAGGAGTTTGTCGTGTTGGATGGCTTGCTTTAGATGAAGAAACTTATGAAAATGTCAGACAGAGCACGACATGTTATTCTGATTTGTCTAGGAAAGAGAAAAGAGCCAAAACTATCAAAGATGTAGATAATCTAAATTCTGAAAGTACCGTAAATGGGGCATCTAGGAACTATGGTTTATGGAAAGATGGATTTTCCTATGATATAGAGTTCTTATCCATATTCTTGGATAGAGATAGAGACCATTACCTTTCCCCGTGGAGCGTAGGCAACAGCATTGGTCAACGAGAACTAAGAGAATGGTTGTCGAAGCTTTGGATTCAAAAACCACAAATGAGAGAGCTTATATGGAAGGGGGCATGTATTGCACTAAATGCTGACAAGTGGTTGGAATGTGCATCAAAAATTTGTGCCATCCACAATTTGCCTCTTCCCAGTGACGATGAAAGGCTTCCAGTTGGCTCGGGTAGCAATCCTGTTTATCTAGTGGGGAACTCTGTTGTTAAGATTTTTGTTGAAGGAGGACTGGAAGCTTCTCTTTATGGTTTTGGCACAGAGCTAGAGTTTTACAGCCTACTTCATGAAATCAACTCCCCTCTCAAGAAACATATTCCTGGTATTTTGGCCAATGGGATCATTTATGTTGAAGATGGATCTTTTAACAATTTAACTTGGGATGGAAAAGGAGTCCCTGACATCATTTCAAAGAGCAATCTCATCAAGACAAAATGTGATGTTCATGGTTTCTCATTTGGGGTATGGGGCAAGAAACAACTTGAGTATAAGAATGCTGGGATGGAAATGGATGGATCGGATAGTTTAGCAGGTCACTCAAGTATATGGCCATATATGATAATGAAACGATGTGAAGGGAAAATGTTTGCAGATTTAAGAGACACACTCTCATGGGAAGATGCAACAAACTTGGCCTCCTTCTTAGGGGAGCAGCTGAACCACCTTCATCTCTTACCACATCCACCTTTGAATATTTCATCTTTAACAGATATTGAACATGAATTGAGCTTTACTGGAACCGATGGTTGTGGTGCAACTGTTAATTATAAATCAAATACTGCAGCAGAATGGGGAGTCTTCCTAAGAAACTTAACAATGATGCGGAAGAATGTTTCAAGCCGTTTGACCAAGTGGGGAGATCCAATCCCTAGCAGTTTGATAGAGAAAATTGATGAATATGTCCCGCCTGATTTTGTTAAGCTGCTAAACATAATTGAGGTTTCTCCAAACTCACTTCTTTCCTACTGGATACAGAGGAATAAAATTGGTTTTCAAATTTCTCACTTTTATTTGACTTCAGAATCTCCCAAGGGGTGCTTGTAA 2355 0.3932 MFLLSSIDASKLTFIIHFPFCFGLYFYAYIFRVGYHECSENLPDKYKEYQPRPLYFDGFNSLFLYRRLYRCHTTLESFHADDGNVERRKDLSLKDFYDQFDAKKPVMLTGLVETWPARHKWTTDQLLQNYGDVAFKISQRSSRKVSMKFKDYVSYMEVQHDEDPLYIFDEKFGEVAPSLLKDYSVPHLFQEDFFDILDAEQRPSYRWLIIGPQRSGASWHVDPALTSAWNTLLSGRKRWALYPPGKVPLGVTVHVNEEDGDVNIETPSSLQWWLDYYPLLPDEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNYVNSNNFEFVCLDMAPGYRHKGVCRVGWLALDEETYENVRQSTTCYSDLSRKEKRAKTIKDVDNLNSESTVNGASRNYGLWKDGFSYDIEFLSIFLDRDRDHYLSPWSVGNSIGQRELREWLSKLWIQKPQMRELIWKGACIALNADKWLECASKICAIHNLPLPSDDERLPVGSGSNPVYLVGNSVVKIFVEGGLEASLYGFGTELEFYSLLHEINSPLKKHIPGILANGIIYVEDGSFNNLTWDGKGVPDIISKSNLIKTKCDVHGFSFGVWGKKQLEYKNAGMEMDGSDSLAGHSSIWPYMIMKRCEGKMFADLRDTLSWEDATNLASFLGEQLNHLHLLPHPPLNISSLTDIEHELSFTGTDGCGATVNYKSNTAAEWGVFLRNLTMMRKNVSSRLTKWGDPIPSSLIEKIDEYVPPDFVKLLNIIEVSPNSLLSYWIQRNKIGFQISHFYLTSESPKGCL 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00722 784 ProSiteProfiles JmjC domain profile. 174 337 IPR003347 -
Adu08g00722 784 Pfam Cupin-like domain 102 324 IPR041667 -
Adu08g00722 784 SUPERFAMILY Clavaminate synthase-like 73 329 - -
Adu08g00722 784 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 47 686 - -
Adu08g00722 784 Gene3D Cupin 67 322 - -
Adu08g00722 784 PANTHER JMJC DOMAIN-CONTAINING PROTEIN 8 47 686 - -
Adu08g00722 784 SMART cupin_9 165 332 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00722 Adu-Chr8 13109565 13118770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00722 54 750 Glycosyltransferase AT1G78280 62.093 0.0 922
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Adu08g00722 Cupin_8 3.1e-24 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00722 - - gmx:100792541 1235.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00722 08 13109565 13118770 Adu08g00722 08 13109565 13118770 ECH