Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00714 ATGGCATATCCGCATTACCGGCCACATCAGTTCGGAGACACCACATTCACCAAACTCTTCGTTGGAGGCTTAGCTTGGGAGACTCCAACTGAAGAACTCAGAAAGTACTTTGACCAGTTCGGTGAAATCCTTGAAGCCGTTATCATCACTGATAAGAACACAGGAAAATCCAAAGGCTACGGTTTCGTAACGTTCCGCGATCAAGAATCAGCAAGGAGAGCATGTTCTGATCCAAACCCAGTGATTGATGGAAGAAGAGCGAATTGTAATATTGCTTCTCTTGGCAGGACTCGACCATCACCACCCCGAGGCAGGAACTATATGGTTCAAGGAGGAGGAGGAGCACAACAGGGGGCGTCGTACGGCGGTGTTCCGGCGGGAGCAGGACCGTCATCATTGGCAGCAGCACCACCACTAATGTACCCGCCACCGTATGGCTACCCAACCTACACTCCTGAATACGGGTACCACCACCAAGCGACATTGTACACCCCACAGATGCAGCAAGCACAATATTATCATCATCAACAACAACAAATATATGGATCACCATCATCCGCTATGGGATCACCATATTACTATGGTGGTTACTCAATGCAAGCACCAAGAAGCACATTACTTTCTTCACCGCAGCATGCAAATCGTTTACCACCACCAGCTGCAGCTGCCGGACCCTCCTATGTATACTACCCTACCACACCAATGGAACCCTCCTCCTTCACTCCTTACCATCATCATCCTCTCCAACAACCAACAATAAGGCATCCCTTTCCATCTCCTACTGATCTACAAACTCAGCAGCAGCAACGAACATCATCATCATCAACTGAAACAGCAGCAGCTGGAGGAGTAGTTATAACTTCATCAGAAAGTTCGAATACCCAGCAAGGGAAGAAGAATAACTAA 906 0.4812 MAYPHYRPHQFGDTTFTKLFVGGLAWETPTEELRKYFDQFGEILEAVIITDKNTGKSKGYGFVTFRDQESARRACSDPNPVIDGRRANCNIASLGRTRPSPPRGRNYMVQGGGGAQQGASYGGVPAGAGPSSLAAAPPLMYPPPYGYPTYTPEYGYHHQATLYTPQMQQAQYYHHQQQQIYGSPSSAMGSPYYYGGYSMQAPRSTLLSSPQHANRLPPPAAAAGPSYVYYPTTPMEPSSFTPYHHHPLQQPTIRHPFPSPTDLQTQQQQRTSSSSTETAAAGGVVITSSESSNTQQGKKNN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00714 301 MobiDBLite consensus disorder prediction 240 301 - -
Adu08g00714 301 Gene3D - 4 115 IPR012677 -
Adu08g00714 301 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 17 94 IPR000504 GO:0003723
Adu08g00714 301 CDD RRM_RBM24_RBM38_like 17 92 - -
Adu08g00714 301 PANTHER - 1 281 - -
Adu08g00714 301 SMART rrm1_1 18 90 IPR000504 GO:0003723
Adu08g00714 301 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 19 76 IPR000504 GO:0003723
Adu08g00714 301 SUPERFAMILY RNA-binding domain, RBD 6 121 IPR035979 GO:0003676
Adu08g00714 301 MobiDBLite consensus disorder prediction 255 301 - -
Adu08g00714 301 PANTHER GEO13361P1-RELATED 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00714 Adu-Chr8 12978947 12983797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00714 13 93 C2H2 Transcription Factor Family AT2G19380 40.741 1.30e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00714 K25006 - gmx:100787086 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00714 08 12978947 12983797 Adu08g00714 08 12978947 12983797 ECH