Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00710 ATGGAATTTGACACAGTACTAGAAGCTAAAGACTTCTGGAAAAGTTACGGTGGAATGATGGGTTTTGATGTTCGACAATTGTATGCAAATAAATGCAAGCTTGATAATTCTGTAAGTAGTTTTAGACTTGTTTGTGCAAAGGAAGGCCAACGAAGACCAGATAAACGGGATCATTTAACAAAGCAACCTCGCGCCGAGACTAGAACAAGTTGCCAAGTAAGAATGTCACTCAAGTTTGCTCGAGATATTAAAAAATATGTGATTTGTGACCTTGAGTTAAATCACAATCATATTTTGCAAATTTCGGAAACCAGTCATATGATGCCATCACAAAGAAAGATTTCAGAAGTACAAGCATTGCAAATAGATTTGGCAGATGAAGCTGACATAAGACCAAAGGAAACACATGAACTAACAAATTTACAAGCTGGTGGTAAAGATGTCCTTGGATATACCAAACAAGACCAAAAGAACTATCTTCGAAGCAAACGAAAGCGAGACTTGGCCTATGGTGAAGCAGGGAATAAGTTGAAAGATGGTTCTTTTATCTTGAGAGATTTCAAAGCTTGTATATATAATTCTGAAGATCAGTTTCAATTTCAAGAGACATGGGATGCATTGCTTCAAAGATACAAAGTGGAAGACAATTCTTGGTTGAAGAGTATTTATAAAGTGAAGGAAAAATGGGCTCATTGCTATATGAAGAAGGTGTATACTATTGGAATGCGAAGTACTCAACTTAGTGAAAGTTTTAACAGTGATTTGAAAGATTTTATGCGGTCAAATTTAGACATAATACATTTTCTCAAACAGTTTGAGCTAGCTGTTGGTGGCAAGCGATACAAAGAGCTACAAGCTGAATACAATGCAAGACAAAAGCTTCCTAGACTTAAGATGATTCATTCGCCGTTATTGAAGCATGCTGCACAGGTATATACTCCTAATGCATTTGATTTATTTCAAAATGAGTTTGATTGGAGTTCTGCTGCATATATTATTTCTCGTATAGAGAACAATCAAATGTCTGAATATCAAGTTGCTATTTTTGATAAAGATGGAGAATACACTGTATCCGGCAATGTGAAAGATATGATTATTTCTTGTAGTTGTGGAATGTTCGAAACAATGGGTGGAATATTTGAAATAACAGGATTCTTATGTTGTCATTGTTTAAAAGTTTTAAATGTTTGGGATGTGAAGCAAATTCCGGCTCAATACATTATGAAAAGATGGACTAGAGAAGCAAGAGAGATGATTGTTCATGACTCAGATGGAAAAGTTGTTCAAAGTGATACTAGAGCGGATGCTACAGCACGGTACAAGAATATATGTTTCAAAGCAATCAAATTAGCTGCTCGATCATCAGATTTTGAAGTAACATCTAATTTTGTTGAGCAAGTTATAGAGGAGACATATAAGAAGGTAGATTCTTTTTGTAGACACAATCAAAATGATAATGTTTCAAATATTTTGAATGCAAAAGAAATCGTTAATAGCTGTTCAGATGGAGATGCGTTAGAAAGATTACTTGAAAATGTGAAAGGATTGAAAAAAAAGGAAGGACGACAAGGTAGAAAAAGACTCAAGAGCTGGGTTGAAAAACAATCAAACAAGAGAATGGCGTCAACAAATGGAGTGAAGTTACAACACCAAATTTAG 1659 0.349 MEFDTVLEAKDFWKSYGGMMGFDVRQLYANKCKLDNSVSSFRLVCAKEGQRRPDKRDHLTKQPRAETRTSCQVRMSLKFARDIKKYVICDLELNHNHILQISETSHMMPSQRKISEVQALQIDLADEADIRPKETHELTNLQAGGKDVLGYTKQDQKNYLRSKRKRDLAYGEAGNKLKDGSFILRDFKACIYNSEDQFQFQETWDALLQRYKVEDNSWLKSIYKVKEKWAHCYMKKVYTIGMRSTQLSESFNSDLKDFMRSNLDIIHFLKQFELAVGGKRYKELQAEYNARQKLPRLKMIHSPLLKHAAQVYTPNAFDLFQNEFDWSSAAYIISRIENNQMSEYQVAIFDKDGEYTVSGNVKDMIISCSCGMFETMGGIFEITGFLCCHCLKVLNVWDVKQIPAQYIMKRWTREAREMIVHDSDGKVVQSDTRADATARYKNICFKAIKLAARSSDFEVTSNFVEQVIEETYKKVDSFCRHNQNDNVSNILNAKEIVNSCSDGDALERLLENVKGLKKKEGRQGRKRLKSWVEKQSNKRMASTNGVKLQHQI 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00710 552 ProSiteProfiles Zinc finger SWIM-type profile. 355 398 IPR007527 GO:0008270
Adu08g00710 552 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 175 IPR031052 GO:0006355
Adu08g00710 552 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 175 537 IPR031052 GO:0006355
Adu08g00710 552 PANTHER OS04G0421700 PROTEIN 1 175 - -
Adu08g00710 552 PANTHER OS04G0421700 PROTEIN 175 537 - -
Adu08g00710 552 MobiDBLite consensus disorder prediction 535 552 - -
Adu08g00710 552 MobiDBLite consensus disorder prediction 525 552 - -
Adu08g00710 552 Pfam FAR1 DNA-binding domain 11 100 IPR004330 -
Adu08g00710 552 Pfam SWIM zinc finger 344 395 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00710 Adu-Chr8 12896500 12898602 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu08g00710 FAR1 1.9e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00710 - - ahf:112705019 592.423