Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00704 ATGGACATGGACATGGATGGCATCCCAGACAGCCTCGATTTCTCCGAACACAGCACCACCACACCCACGTCCGATGAGGACTGCAACTGGGATCATCTGTCCCCACTCGTCAACTGGGAGTCCTTCACCACCGACAACGACGACTTTCACAGCCTCGTCGGTTCCATCGTCGACGATGCGCGCGCCGCTGCCATCTTGAGCCAAGACCACGGCTACCTTGAGGAAGCCTCAAGCGCCGATGACGGCAGCGTCTCAGCAACAGAGGACAAAAGAGGCGGCGGCGAAGATCCCAAGGACTTGCGGCTGGTCCACCTCCTGATAGCGGCGGCGGAGGCACTCGCCAGCACCACCAAGAGCCGCGACCTGGCTCGAGTGATATTGACTCTGCTAGAAGGCGCCTGTGGGGGTGCGCATAGCGCCACAAAGCACCATCCTATTCAAAGTGGGGACCACCAGCAAACAGACACAATAACGGCCTTCCAAATTCTCCAGGACATGTCCCCTTACATTAAGTTTGCTCACTTCACAGCTAACCAGGCCATCCTCGAGGCCGTAGCCCAGGAGAGGAGGGTTCACGTCGTTGATTATGATGTCGCAGAAGGGGCCCAATGGGCCTCCCTAATGCAGGCCTTTGTGTCCCGTAAGGAAGGCTCACCGGGCCCTCACTTAAGGATCACCGCATTATCACGGGGTGGAAACAGCGGACGGAGATCCATCGCCACCGTTCAAGAAACCGGTCGGCGATTAGTTGCGTTCGCGGTGTCCCTTGGGCAACCGTTTTCTTTTCATCACTGTAGGTTAGACCCTGACGAAACCTTTCGACCTTCTTCTCTGAAACTTGTTCGTGGAGAGGCTTTGGTTTTCAACTGCATGCTGCACCTGCCGCACCTCAGTTATCGGGCCCCGGACTCTGTCACTTCGTTCTTCAACGGTGCGAAGGCGTTGGGTCCGAAGCTAGTGACGGTGGTGGAAGAAGAGGTGGGGCCCGTTGGAGGGGAAGCGGGCTTTGTAGGGAGGTTCATGGAGTCTTTGCAGCACTACTCGGCAGTGTACGATTCGCTGGAGGCGGGGTTTCCGATGCAGAGTCGGCCCCGGGCTCTGGTGGAAAGGGTTTTCTTGGGCCCGAGAATAGCGGGGTCGTTGGGGCGGATATACTGGAGGGGTGGGGATGAAGAGAGAGGATCGTGGGGGGAGTGGTTGAGTGCGGCGGGGTTCACCGGAGTTCCTATAAGCTTTTTTAATCATTGCCAAGCTAAGCTGTTGGTTAGTCTATTTAACGACGGGTATAGAGTGGAGGAATTTAGTAACAATAAATTGGTGTTGGGTTGGAAATCAAGGCGTTTGCTTTCAGCATCTATTTGGAATTATTCTATTTCAGAACCTTAA 1386 0.5541 MDMDMDGIPDSLDFSEHSTTTPTSDEDCNWDHLSPLVNWESFTTDNDDFHSLVGSIVDDARAAAILSQDHGYLEEASSADDGSVSATEDKRGGGEDPKDLRLVHLLIAAAEALASTTKSRDLARVILTLLEGACGGAHSATKHHPIQSGDHQQTDTITAFQILQDMSPYIKFAHFTANQAILEAVAQERRVHVVDYDVAEGAQWASLMQAFVSRKEGSPGPHLRITALSRGGNSGRRSIATVQETGRRLVAFAVSLGQPFSFHHCRLDPDETFRPSSLKLVRGEALVFNCMLHLPHLSYRAPDSVTSFFNGAKALGPKLVTVVEEEVGPVGGEAGFVGRFMESLQHYSAVYDSLEAGFPMQSRPRALVERVFLGPRIAGSLGRIYWRGGDEERGSWGEWLSAAGFTGVPISFFNHCQAKLLVSLFNDGYRVEEFSNNKLVLGWKSRRLLSASIWNYSISEP 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00704 461 Pfam GRAS domain family 143 454 IPR005202 -
Adu08g00704 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 137 455 IPR005202 -
Adu08g00704 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 16 133 IPR005202 -
Adu08g00704 461 PANTHER SCARECROW-LIKE PROTEIN 26 137 455 IPR030028 -
Adu08g00704 461 PANTHER SCARECROW-LIKE PROTEIN 26 16 133 IPR030028 -
Adu08g00704 461 MobiDBLite consensus disorder prediction 74 96 - -
Adu08g00704 461 MobiDBLite consensus disorder prediction 1 26 - -
Adu08g00704 461 ProSiteProfiles GRAS family profile. 93 455 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00704 Adu-Chr8 12792703 12794167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00704 100 455 GRAS Transcription Factor Family AT3G03450 33.943 8.99e-48 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu08g00704 GRAS 2.3e-86 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00704 - - gmx:100787926 590.112