Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00672 ATGTCTTCGTCTTCTTCGGCGGCTGCCGCAAATAATTCGCCGTGTGCGGCATGCAAGATTCAGCGTAGAAAGTGCACACAGGAGTGTGTGTTCGCGCCGTACTTCCCGCCGGACAACCCGCAGAGATTTGCGTACGTTCACAAAGTGTTCGGAGCAAGCAACGTGGCAAAACTCCTCAACGACCTGAACGCAGCTCAACGAGAGGATGCAGTGAAGTCACTAGCATACGAGGCGGAGGCGCGTCTCCGTGACCCCGTGTACGGATGCGTAGGCCTCATTTCACTTCTCCAGCACAAGCTCAAACAGCTTCAGGCTGAACTTAACCATGCCAAGACGGAACTCGCAAACTACGTTGTCGTTAACAATAATAATAACGGTTCACCTCACGCGCCTGTTCTCCCGCTCTTTAACAACCAACACCATCAGCAACCGTCTCAACTGAATCGTAACAACCTCTCACATCACTCTCTGCAACCGTTTTCTGTTTCTGTTTCCCCTTTTCAGGAGGCTGTTATGCAGCACCAGCAAGAGATTTTGGGGTTTGAGAACTATATGACGATTGGTTCTTCTTCCGCTGCTTCTGCTGTCTCTCCTTCGCTGGCTCTTGGACCGGCGAGGAGGGTAGGAATAGCAGGAGGACTGGTCCTTCTTGTTGCTGATTTCATAATTTCATTCTCCTTCGGTTCAAACATTTGTCAACCTAGTCTCTTATCATAG 717 0.5035 MSSSSSAAAANNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNDLNAAQREDAVKSLAYEAEARLRDPVYGCVGLISLLQHKLKQLQAELNHAKTELANYVVVNNNNNGSPHAPVLPLFNNQHHQQPSQLNRNNLSHHSLQPFSVSVSPFQEAVMQHQQEILGFENYMTIGSSSAASAVSPSLALGPARRVGIAGGLVLLVADFIISFSFGSNICQPSLLS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00672 238 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 11 173 - -
Adu08g00672 238 Coils Coil 93 120 - -
Adu08g00672 238 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Adu08g00672 238 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 173 - -
Adu08g00672 238 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00672 Adu-Chr8 12094968 12096841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00672 9 118 AS2 family AT5G66870 78.182 5.11e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu08g00672 LOB 1.9e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00672 - - adu:107460830 386.726