Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00661 ATGGATATATTTGAGACATTCCCACAAGTTAGCATGTGGGGTGACAACTTTAAGGTTGATGGTGGCCTCATAAATTCAATCACTTCTCCAATGTTGTTGATGAGCACAAGCACCATGGCCATGGATAACAAGCCTGAATATGTTCCACATGAATTGAGGGAACAATCTAGACAAAATCAAGAGGCTACCAATAAAGATGTTAGTAAGGTAATGAAATTTCATGAGAGTGTTACTCTTAAAACATTTGCAATGTATCTTGATCATGAATCGAAAAAAGGTAGCGAAATTGGACTTACAAAGAAGGCTTATGTTCAACAATTAGAAACAAGCCGTTTGAAGCTCATGCAATTGGAGGAGGAGATTGTTAAAGCTAAAAAGCAGTTTTTTTTAACCTTCCTTACAATAAATTCTTCTATTAAGTGGTGGTCCTTGTATATATGTGAAGCAGGGATTGTTTTGTTTGAAATTGAATATGGAAATTGGATTGAAGAGCAACACAAACTGAATGAAGAACTCAGAAATGCATTCCAAACTCAAGCACCTGATGAACAACTCAATCAACTTGTTCAAACTCTGTTGAATCATTACTCAAATCTTTTCAAGATGAAATCAGATGCTGCAAAGGCTGATATATTCTACCTAATCAGTGGTGTCTGGAAATCATCCGCGGAGCGCCTTTTCCTTTGGATCGGAGGATCTCGCCCTTCGCAGCTTCTAAGTATCATTGTGCCACAGCTTGAACCTTTAACTGAACAACAAACTGCTAGCATTAGCAGACTCCGGCTATCGTCGCAACAAGCCGAAGATGCTCTCTCACAAGGACTGGATAAACTCCAGCAGAGTCTTGTCCACAACATTGCAGTTGATCCATTGGTAGCAGGAAACTTTGGGTTTCAGATGGCTGATTCCATTGAGAAAATTGAGGGACTTGAAGGCTTCCTTAACCAGGCAGATCATCTTAGGCAACAGACACTGATACACATGTCAAGGATCCTAACAACACATCAAGCTGCTCAAGGATTGCTGGCTTTGGGGCAATACTTGCAAAGACTTCGTTCTCTTAGTTCTCTTTGGGCTTCTCCTTCCAAATTTCACCGGAACATTATGAGCAATTTGATAACCCTGTGTAGGCCTCACACACTGTTCTTCTCTTCTTTCATTACTTGCAGACACCAGTTTCAAACCAGGGCTTCTTCTTTTCGGAACCCTAATTGCAATTCCCGTTTTCCCTCTTTCTCGTTATACTCTTCCTGGCTCATCGATTCCTGGGGTTCGAGCAGGACTGGACTATGGTTTCGCGTTAATCAGAGGAGAACTCTGGCCAAGGCTTCAAATTGGGACGAACAACAATCCCCGTATGAAACCCTTGAATTGGACAGAGATGCTGATGAAGAACAGATAAAGAGCGCTTATCGACGATTGGCTAAATTCTATCATCCAGATGTCTATGATGGTAGAGGATCCCTTGAGGAAGGCGAAACAGCAGAAGCTAGGTTCATTAAGATCCAAGCTGCTTATGAATTGCTTATAGACGATGAGAAGCGAAGACGGTATGATATGGATAACCGAGTCAACCCTATGAAGGCGTCTGAGGCATGGATGGAGTGGCTAATGAAAAAGCGAAAAGCTTTTGATCAACGTGGTGATATGGCAGTTGCTGCTTGGGCTGAGCAGCAACAGCGAGAGTTGAATCTACGTTTCCGTCAACTTTCTCGTTCAAAGATGGATCCTGATGAGGCAAGGAAGATTCTAGCTAGAGAGAAGGCAGCTGCTGCTAAGAATTTCTCCAATACCCTTAAAAGGCACACACTTGTTCTCAAGAAAAGAGATTTGATGAGAAGAAAGGCAGAGCAAGATCAAGATAAACTTATCAGCCAGCTCTTGGCGGCAGAAGGTCTTGAATCAGATAGTGATGAATGA 1920 0.4203 MDIFETFPQVSMWGDNFKVDGGLINSITSPMLLMSTSTMAMDNKPEYVPHELREQSRQNQEATNKDVSKVMKFHESVTLKTFAMYLDHESKKGSEIGLTKKAYVQQLETSRLKLMQLEEEIVKAKKQFFLTFLTINSSIKWWSLYICEAGIVLFEIEYGNWIEEQHKLNEELRNAFQTQAPDEQLNQLVQTLLNHYSNLFKMKSDAAKADIFYLISGVWKSSAERLFLWIGGSRPSQLLSIIVPQLEPLTEQQTASISRLRLSSQQAEDALSQGLDKLQQSLVHNIAVDPLVAGNFGFQMADSIEKIEGLEGFLNQADHLRQQTLIHMSRILTTHQAAQGLLALGQYLQRLRSLSSLWASPSKFHRNIMSNLITLCRPHTLFFSSFITCRHQFQTRASSFRNPNCNSRFPSFSLYSSWLIDSWGSSRTGLWFRVNQRRTLAKASNWDEQQSPYETLELDRDADEEQIKSAYRRLAKFYHPDVYDGRGSLEEGETAEARFIKIQAAYELLIDDEKRRRYDMDNRVNPMKASEAWMEWLMKKRKAFDQRGDMAVAAWAEQQQRELNLRFRQLSRSKMDPDEARKILAREKAAAAKNFSNTLKRHTLVLKKRDLMRRKAEQDQDKLISQLLAAEGLESDSDE 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00661 639 PANTHER FACTOR TGA7, PUTATIVE-RELATED 1 425 - -
Adu08g00661 639 ProSiteProfiles DOG1 domain profile. 151 361 IPR025422 GO:0006351|GO:0043565
Adu08g00661 639 ProSiteProfiles dnaJ domain profile. 451 522 IPR001623 -
Adu08g00661 639 CDD DnaJ 452 511 IPR001623 -
Adu08g00661 639 Pfam DnaJ domain 452 519 IPR001623 -
Adu08g00661 639 Pfam Seed dormancy control 170 243 IPR025422 GO:0006351|GO:0043565
Adu08g00661 639 ProSitePatterns Nt-dnaJ domain signature. 499 518 IPR018253 -
Adu08g00661 639 Coils Coil 453 473 - -
Adu08g00661 639 SMART dnaj_3 450 514 IPR001623 -
Adu08g00661 639 PRINTS DnaJ domain signature 471 486 IPR001623 -
Adu08g00661 639 PRINTS DnaJ domain signature 540 559 IPR001623 -
Adu08g00661 639 PRINTS DnaJ domain signature 494 514 IPR001623 -
Adu08g00661 639 PRINTS DnaJ domain signature 453 471 IPR001623 -
Adu08g00661 639 SUPERFAMILY Chaperone J-domain 403 518 IPR036869 -
Adu08g00661 639 Coils Coil 100 127 - -
Adu08g00661 639 Gene3D DnaJ domain 439 545 IPR036869 -
Adu08g00661 639 PANTHER TRANSCRIPTION FACTOR TGA9 1 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00661 Adu-Chr8 11849539 11854882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00661 1 360 Calmodulin-binding Proteins AT1G77920 46.832 2.03e-99 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00661 - K14431 ahf:112766429 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00661 08 11849539 11854882 Adu08g00661 08 11849539 11854882 ECH