Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00646 ATGTTCTGGCTATTGTGCACGTTGTTGTTGCCGGCGATGACCAGTTCTGGCCGATGTCAACGGAGGAAGGACATGGCGGCTTCTGGGGCTCAACAACGGGGAGATTCCGCCGAGGCGAGGCCGTCACCGGTGGATTCTCCGGCGGAATTGCCGGGAACCTCTGAGGATTCTGCCGTGTACGAAATTGACTACTTTTCTCAGGCAAGGAAGGCGCTGAGCGAACGTTCCCCTTATGAAGAAGAAGCGTCCACTTCTGGGGTGGTTACTCTGCCAAGTGGGTTATCTAGTTTGTTGAACCGCCATGGGGATAACCGTCGGCGGCACAAGAAGGTTCGGTCCGGGGGCGAGAAGAAGAAGAAGAAATCATCTAGGGCGAGCGAGAAGGCACGTGCTTTCAACATTTGGGACGAGACTGAGGAGTATTTTAGGGACTTATCATTGAGTGATATCGATACCTTAGTGGAGCTTTCTTCGCTGTCTAGGTTATGTTCTCGTCAGTGTTTCTCGATTCCGGTTTTGGGGACTTCTCCGAGACTCGATATAGTAGTTAATAGTAGTGAGGATGACAAGAAAGATGCAATAAAACTGGACTTAGATAGTGGCGAGGATGATAAAAAGGTTGAGGAAGACTTGGGAAGTGAGGAATGTACATTAGGAGTGGAGTCAATTGACAATGCCGCTGCCGAAAACGATTTGCCTCAGGATGATGGAAAAAATGTCTCGTGTGTTAGTTTAGAGTGGCTATTAGGTTGTAGGAGTAAGGTTTCTTTGACTTCTGAGCGCCCTACAAAGAAAAGGAAGCTTTTGAGTGGGGATGCTGATTTGCAGAAAGTTCAAATGACCATTCCTCGTGATGGGGATGAACCCTTTTGTCATTATTGTGGCATGGGGGAGACAGGCAGAGATTTGAACCGTTTGGTTGTTTGTGCCTCTTGTAAAATGGCAGTTCATCAGAAGTGCTATGGTGCGCAAGATGGCGTGGATGAGTCTTGGTTGTGCTCGTGGTGTAAGCTAAAGCGAGGTGTCGAGGGGTCGGTGAATCCTTGTGTGCTTTGCCCGAATAAAGGTGGTGCTTTGAAACCAGTTGATAGCACTGTGGAAGACGTTGAGTCTGTGCAGTTTGTGCACTTGTTTTGTTGTCTGTGGATGCCCGAGGTTTATGTAGATGATTTGAAGAAGATGGAGCCTGTTATGAATGTTGGGTCAATAAAGGAAACCCGGAGAAAATTGGTGTGTAATATTTGCAAACTGAAGTGGGGTGCATGTGTTCGGTGTAGCCATGGAACCTGCAAGACTTCTTTCCATCCGTTATGTGCAAGGGAAGCTCGACATAGGATGGAGGTGTGCGCAAAGTATGGAGATGATAATGTTGAGTTGCGGGCTTTTTGCTTGAAACACTCAGATTTACAAGATAATAGGGGCATCTTGCCATTAGGAGACTCCCTTTCTATTGGCAATACTTTTTTTGAAGCTAATGGCCTTCCAGTAAATAGCGAACACAAGTTGAAAATTGGATGTGGTAGTCCCAATAAATTGAACCACAATGGACTGCAACATAATGTTGGAATGGTAGGGAGGACGATTGAGAATGGTGTTGCATCTGACTCCACCAGTTTTGCACTTATTTTAAAGAAGTTGATAGACCGGGGAAAAGTTGATGCAAAGGATGTAGCAATGGAGATTGGCATTTCACCAGATGCATTAATTGCAAATATTAATGAAGCTTATATGGACCCTGATGTGGTTGACAAAATCGTCAATTGGCTGAAAGCTCATGTGTACACTACTGCATTTCACAAAGGTTTAAAAGTCAAATTCAAACCACCGATTCCTTCCAAGGATGAAAGTGGAGCTGCAGAAGGTTCTGTTGCTCTTCCAACATCTGATTCAGGTTTGTTGGATCCTGTTGCTGTTAAGTCAGTACCTCCAAGGAGGAGAACTGTCAGCAACATTAGGATTTTGAAGGATAATAAAGTGATATGTTCATCTGAGGGGGTTACTAGTGAGAATGGGATGTCAAAAGACAAGTTCAGAGCTGATCAGCTAGACCATGAAATTCCAGGAAGTTCTAATGGAGGGTCTCCAGATGCTACTGTGGTGGACTTAACCAAGCCTGAGGATATGTTTTCGAAAGTTCAAGGGAATGAAGATAAACCACACAAAACCAACTTATCTGAATGTGTTTCAGAAGAAATGTCCAAGCTCTATTCGCAGAATGCTTCTATGTTTTCTGATCGCTACTGTCCTCTCTATTCTGCTGTGAAACTTCTTGATTGTGGTCCCATAAAGGTGGAAGCCAGCTCTAGCTACATTCACCCATCCATCGAGAGGTTGCTACAGATTCATAATGGGAAATTAGTGTGCACTGGTATTTCCAAGCCTGATGAAGGAAATATGGAGCAGTTGCATAGCTCTGGAAAAATGGAACTTTTGGAATCTTCCCCGGAAGATGAAGTGGAGGGGGAACTTCTATTTTTACAGCATAGATTATTGCGGAATGCAGTTGCAAGAAAGAAGTTTACTGATAACTTAATCTCCAATGTGGCAAAGAGGTTGCCGCAGGAGATTGATGCAGCGCATCAGCGAAGGTGGGATTCTGTGATTGTTAATCGATATCTGCGTGATCTTAGAGAGGCAAAAAAGCTAGGTAGGAAAGAAAGAAAGCACAAGGAAGCACAAGCTGTTCTGGCTGCTGCAACTGCTGCTGCTGCGGCATCTTCTCGGGTTTCTTCCTTCCGAAAAGACTCTCTAGATGAATCTATGCAACAAGAGAATTTGTTGAAGTTGGATGCTTTAAGTGGGAGGAATGGTGCTGGTTCTCAGCCAATGCCAAGAGCTAAAGAGACACTTCCAAGAGTAGCTGTGACAAGAACGTCATCAGAGAAATATTCTGATTTCAGCTTGCCAACCTCAGAATATTCTAAGGAGCAATCTAAATCATGTGATATCTGCAGACGATCTGAGACTTTGTTTAATCCCATCCTTGTCTGCTCTGGTTGCAAGGTTGCAGTGCATTTGGACTGTTATCGTAGTGTGAAAGAAACTACTGGCCCATGGTACTGTGAATTATGTGAAGATGCAACATCTAAAAGCTGTGCGACATCTGCTATCAATTTCTGGGAGAAGCCTTATTTTGTTGCAGAATGTGCCCTTTGCGGTGGTACTACTGGAGCTTTTAGGAAATCTTCTGATGGTCAATGGATTCATGCCTTCTGTGCTGAGTGGGTTTTCGAGTCAACATTCAGAAGAGGCCAAATAAATCCAGTTGAAGGAATGCAGTCTGCGCTGAAGGGAGTTGACAAATGTTGCATTTGCCACCGCAAGCATGGTGTTTGTATGAAGTGTTGCTATGGCCATTGTCAAACCTCATTCCATCCATCATGTGCTAGAAGTGCTGGTTATTACATGATTGTGAGGACTACTAGTGGCAAACCACAACACAAGGCTTACTGTGAAAAGCACAGTTTGGAGCAAAAGGCAAAGTCTGAAAAACATGGAATCGAAGAGCTTAAAAGTATGAAGCAAATCCGGGTTGAACTGGAGAGATTACGTCTCCTCTGTGAGAGGATTGTCAAACGTGAAAAATTAAAGCGTGAATTGGTTCTTTGCTCTCATGACATACTTGCCTTCAAAAGAGATCATGTTGCTAGGTCTGTGCTTGTTCATAGCCCTTTCATCCTTCCGGATGGTAGTTCAGAATCAGCTACAACGTCCCTTAGAGGAAACACAGAGGGATACAGATCATGCAGTGAAGCAATCCAAAGATCTGATGACATAACTGTGGACAGTTCAGTTTCAGATAAGCACCGTCTGAGAGCTGCTGTATCCATGGACACTGATCCCAAATTGGATGATGACTGCTCAACCTCACAAAGCCGCTATAATCACAAGATCCCAGATAGGGTTCAATTTTCTGGCAAGCAGATTCCTCGAAGAGCTTATGCCGTGGCACGCAATATTTCAGATGAGAGTGGCGGATTGAGATCCAAATCTAGAAAGCATGCAGACACATTTGGAAAAGAGCTCGTTATGACGTCTGAATTACCGGTGAAAGTATTGCTTCACAGCCTGGTTGGGCATTTGCCCTTGTGGCTGACATCCACCGTATTTGGTGCCAAAGCCATTTGCATCTGGATATGA 4140 0.4454 MFWLLCTLLLPAMTSSGRCQRRKDMAASGAQQRGDSAEARPSPVDSPAELPGTSEDSAVYEIDYFSQARKALSERSPYEEEASTSGVVTLPSGLSSLLNRHGDNRRRHKKVRSGGEKKKKKSSRASEKARAFNIWDETEEYFRDLSLSDIDTLVELSSLSRLCSRQCFSIPVLGTSPRLDIVVNSSEDDKKDAIKLDLDSGEDDKKVEEDLGSEECTLGVESIDNAAAENDLPQDDGKNVSCVSLEWLLGCRSKVSLTSERPTKKRKLLSGDADLQKVQMTIPRDGDEPFCHYCGMGETGRDLNRLVVCASCKMAVHQKCYGAQDGVDESWLCSWCKLKRGVEGSVNPCVLCPNKGGALKPVDSTVEDVESVQFVHLFCCLWMPEVYVDDLKKMEPVMNVGSIKETRRKLVCNICKLKWGACVRCSHGTCKTSFHPLCAREARHRMEVCAKYGDDNVELRAFCLKHSDLQDNRGILPLGDSLSIGNTFFEANGLPVNSEHKLKIGCGSPNKLNHNGLQHNVGMVGRTIENGVASDSTSFALILKKLIDRGKVDAKDVAMEIGISPDALIANINEAYMDPDVVDKIVNWLKAHVYTTAFHKGLKVKFKPPIPSKDESGAAEGSVALPTSDSGLLDPVAVKSVPPRRRTVSNIRILKDNKVICSSEGVTSENGMSKDKFRADQLDHEIPGSSNGGSPDATVVDLTKPEDMFSKVQGNEDKPHKTNLSECVSEEMSKLYSQNASMFSDRYCPLYSAVKLLDCGPIKVEASSSYIHPSIERLLQIHNGKLVCTGISKPDEGNMEQLHSSGKMELLESSPEDEVEGELLFLQHRLLRNAVARKKFTDNLISNVAKRLPQEIDAAHQRRWDSVIVNRYLRDLREAKKLGRKERKHKEAQAVLAAATAAAAASSRVSSFRKDSLDESMQQENLLKLDALSGRNGAGSQPMPRAKETLPRVAVTRTSSEKYSDFSLPTSEYSKEQSKSCDICRRSETLFNPILVCSGCKVAVHLDCYRSVKETTGPWYCELCEDATSKSCATSAINFWEKPYFVAECALCGGTTGAFRKSSDGQWIHAFCAEWVFESTFRRGQINPVEGMQSALKGVDKCCICHRKHGVCMKCCYGHCQTSFHPSCARSAGYYMIVRTTSGKPQHKAYCEKHSLEQKAKSEKHGIEELKSMKQIRVELERLRLLCERIVKREKLKRELVLCSHDILAFKRDHVARSVLVHSPFILPDGSSESATTSLRGNTEGYRSCSEAIQRSDDITVDSSVSDKHRLRAAVSMDTDPKLDDDCSTSQSRYNHKIPDRVQFSGKQIPRRAYAVARNISDESGGLRSKSRKHADTFGKELVMTSELPVKVLLHSLVGHLPLWLTSTVFGAKAICIWI 1379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00646 1379 MobiDBLite consensus disorder prediction 17 56 - -
Adu08g00646 1379 CDD ePHD 1049 1154 - -
Adu08g00646 1379 ProSitePatterns Zinc finger PHD-type signature. 291 336 IPR019786 -
Adu08g00646 1379 MobiDBLite consensus disorder prediction 102 119 - -
Adu08g00646 1379 MobiDBLite consensus disorder prediction 75 125 - -
Adu08g00646 1379 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1046 1156 IPR013083 -
Adu08g00646 1379 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 344 469 IPR013083 -
Adu08g00646 1379 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 968 1031 IPR013083 -
Adu08g00646 1379 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 277 341 IPR013083 -
Adu08g00646 1379 SUPERFAMILY FYVE/PHD zinc finger 970 1027 IPR011011 -
Adu08g00646 1379 MobiDBLite consensus disorder prediction 933 956 - -
Adu08g00646 1379 SUPERFAMILY FYVE/PHD zinc finger 279 339 IPR011011 -
Adu08g00646 1379 SMART PHD_3 290 337 IPR001965 -
Adu08g00646 1379 SMART PHD_3 1101 1155 IPR001965 -
Adu08g00646 1379 SMART PHD_3 980 1025 IPR001965 -
Adu08g00646 1379 SMART PHD_3 411 467 IPR001965 -
Adu08g00646 1379 ProSiteProfiles Extended PHD (ePHD) domain profile. 346 467 IPR034732 -
Adu08g00646 1379 PANTHER PHD FINGER PROTEINS 798 1348 - -
Adu08g00646 1379 PANTHER PHD FINGER PROTEINS 241 471 - -
Adu08g00646 1379 ProSiteProfiles Zinc finger PHD-type profile. 288 339 IPR019787 -
Adu08g00646 1379 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 798 1348 - -
Adu08g00646 1379 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 241 471 - -
Adu08g00646 1379 Coils Coil 1173 1193 - -
Adu08g00646 1379 ProSitePatterns Zinc finger PHD-type signature. 981 1024 IPR019786 -
Adu08g00646 1379 MobiDBLite consensus disorder prediction 78 99 - -
Adu08g00646 1379 ProSiteProfiles Extended PHD (ePHD) domain profile. 1046 1155 IPR034732 -
Adu08g00646 1379 ProSiteProfiles Zinc finger PHD-type profile. 978 1027 IPR019787 -
Adu08g00646 1379 Pfam PHD-finger 992 1025 - -
Adu08g00646 1379 Pfam PHD-finger 304 337 - -
Adu08g00646 1379 Pfam PHD-zinc-finger like domain 348 466 - -
Adu08g00646 1379 Pfam PHD-zinc-finger like domain 1048 1154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00646 Adu-Chr8 11653178 11662302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00646 285 469 C2H2 Transcription Factor Family AT3G14740 29.319 2.21e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Adu08g00646 zf-HC5HC2H_2 2.2e-23 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00646 - - aip:107606101 2628.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00646 08 11653178 11662302 Adu08g00646 08 11653178 11662302 ECH