Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00643 ATGCATCATCTACCTCCATTTTTTAATTCCAGTAATAGAAATCAACGCAGCAACAACAATTCCATGGATTCAAAGAAGCTCCGAAGGAAGCCCAAGCTCGAGCGCCGCAATGCCGTCAAGTACGTTGACTACGACGCCGACGGCTCCACCACCTCCTCACACGATGATTCCTCTTCCTCCGTCGGTGGCGGAAGCAGAAGCGATTCCATTTACACCCGATCCATGGATTTCTACGACCGAACTAGCTTCCGAATTGAGGGAACCGAGGGCGAGTTTGACCGGATTTGCCGGAGCTTGGGGCTCTCCGGCCCGGAGGACTTCGCCATACCGGCGGCGGCCTGGGAAGCCATGAAGGTCCGGTCGTCATCGGATATTCTCCCGAGGCTGAATCCGAGGGAAGAGCGAGTGCCACCGCGGCGGAGCGACGTCGTTGCGGTGGGTGAATTGGCCGAGGAATTCGAAGGTGGAGCTAGGGTTAGGGTTGATGAGACCGGTGGTTGCTGCGCGGAGAGCTCCAGTGGCGTATGCGGAGGAATCAAAGGTGTTCGTCCGCCGATGCTTAGGCCGCCACCGGGGACCAAGGTGCCTGTGGTGGACAACACAAGCTCCACTTGGGACCTTCTAAGGGACTTTGCTCCAGAAGGTTCAGACAACGGCCACTTACTACAGATAGAACCAGATAAAGAAGACGAAGAAGAAGAAGAAAAGCAAGTAGTAGTGGTGGAGGAAGGAGGAGGTAAGAGAGAAGAGGAGGTGGAAGAAAGGGTGGATAATGCGGCGAGGATTGCGGAGATTGTTGCTGATCTTTCGGGGTCGTGTGGTTTTAGCACTTCAAATGAGGAAGATGATACTTCAAGCACTACCACGGGTCCAAGGTCTAACAATATATCTCCCAATGGAAGAATCAAGTGTATTATTACCTCTGGCGATTGGCAAAAGGGTGAGCTTCTTGGACGTGGTTCCTTTGGCTCAGTCTATGAAGGAATTTCTGGAGATGGAGTCTTTTTTGCTGTGAAAGAGGTTTCACTGCTTGATCAAGATAATCAGGGAAAGCAAAGTATCTATCAACTGGAGCAGGAGATAGCACTTTTGAGTCAGTTTGAACATGAGAACATAGTTCAATACTATGGCACAGAAACGGATGAATCAAAGCTGTATATCTTTCTTGAGCTTGTAACCAAAGGTTCTCTTGCAAGCCTTTATCGCAGGTATACACTTCGAGATTCCCAAGTCTCTGCCTACACAAGACAGATTCTGCATGGCTTGAAGTATCTTCATGATCGAAATGTGCTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTAAAGCTTGCTGATTTTGGATTGGCAAAGGCAACCAAATTGAATGACATTAAATCATGCAGGGGGACACCATTGTGGATGGCTCCTGAGGTTGTGAAAGGAAAGAACCAAGGTTATGGGCTTCCAGCTGATATGTGGAGTTTGGGATGCACTGTACTAGAAATGTTAACAGGCAAACTTCCATATTCGGAGTTTGAAAGTATGCAGGCATTATATAGAATTGGGAAAGGTGAGCGTCCTTCTATGCCTGATTCTCTTTCAAAGGATGCTCGAGACTTTATCCTGCAGTGCCTTCAAGTTAATCCAGATCACCGTCCCACTGCTGCCCAACTCTTGAGCCATCCATTTATCCAAAGACCAGTTTCCCACTCGTCGGGCTCATTTCCTAATCTTCCAGGCAAAAAAGGTTAA 1752 0.484 MHHLPPFFNSSNRNQRSNNNSMDSKKLRRKPKLERRNAVKYVDYDADGSTTSSHDDSSSSVGGGSRSDSIYTRSMDFYDRTSFRIEGTEGEFDRICRSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLNPREERVPPRRSDVVAVGELAEEFEGGARVRVDETGGCCAESSSGVCGGIKGVRPPMLRPPPGTKVPVVDNTSSTWDLLRDFAPEGSDNGHLLQIEPDKEDEEEEEKQVVVVEEGGGKREEEVEERVDNAARIAEIVADLSGSCGFSTSNEEDDTSSTTTGPRSNNISPNGRIKCIITSGDWQKGELLGRGSFGSVYEGISGDGVFFAVKEVSLLDQDNQGKQSIYQLEQEIALLSQFEHENIVQYYGTETDESKLYIFLELVTKGSLASLYRRYTLRDSQVSAYTRQILHGLKYLHDRNVLHRDIKCANILVDANGSVKLADFGLAKATKLNDIKSCRGTPLWMAPEVVKGKNQGYGLPADMWSLGCTVLEMLTGKLPYSEFESMQALYRIGKGERPSMPDSLSKDARDFILQCLQVNPDHRPTAAQLLSHPFIQRPVSHSSGSFPNLPGKKG 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00643 583 MobiDBLite consensus disorder prediction 1 67 - -
Adu08g00643 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Adu08g00643 583 MobiDBLite consensus disorder prediction 272 299 - -
Adu08g00643 583 MobiDBLite consensus disorder prediction 46 67 - -
Adu08g00643 583 MobiDBLite consensus disorder prediction 7 21 - -
Adu08g00643 583 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Adu08g00643 583 Pfam Protein kinase domain 312 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00643 583 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 78 577 - -
Adu08g00643 583 MobiDBLite consensus disorder prediction 227 252 - -
Adu08g00643 583 ProSiteProfiles Protein kinase domain profile. 311 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00643 583 SUPERFAMILY Protein kinase-like (PK-like) 309 567 IPR011009 -
Adu08g00643 583 SMART serkin_6 311 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00643 583 Gene3D Transferase(Phosphotransferase) domain 1 308 575 - -
Adu08g00643 583 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 78 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00643 Adu-Chr8 11594379 11600107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00643 13 568 MAP Kinase Kinase Kinase AT4G08500 48.124 2.95e-171 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Adu08g00643 Pkinase 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00643 K13414 - gmx:100819999 728.013