Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00622 ATGGAAATAGACATGCTTGACATTCATAACATTGAATTCTCCGGCTACAGTACCACCACCACTCCCTCTTCCGACGAAAACCCTGCCTACACCAACTGGACCCACTGGTCCCCCCTCGTCAATTGGGAAGCCATCGCCGCCCCTTATGACGACTTCCACCACCTCATCGACTCAATCATCGACCATCACCACGCCACCACCCCCCTCCACCTCACACCCGACCACGATGACGAAGACGACACAACCACCGCCAACACAGCCGACGATGAATCGCCACCACTTCCAACAACACCAACACCTACCATCGCCGGCGAAGACGAAACAAAAGGCCTGAGGCTAGTGCACCTCCTCATGGCCGCAGCAGAATCCCTCACTGGCGCCACCAAGAGCCGTGACCTGGCTCGAGTGATATTGCTTCGACTCAAAGAGTTGGTTCCTTTTAGCAGCACCAGCAGCAGCACAGGGGCAACCAACATGGAAAGACTCGCCGCGCATTTTACCCAGGCACTCCAAGGTTTGCTAGATGGCGCAGGGGGTGGGGGCGCGCACAATAATCACAGTAACAATAACAAACAATACAATTACTGGTCCCACCAAACGGAAACTCTAACAGCATTCCAACTGCTTCAAGACATGTCCCCTTACGTCAAGTTCGCCCACTTCACCGCCAATCAGGCCATCCTTGAAGCCATCGCACACCACAGACGGGCCCACATCGTCGATTTCGACATCATGGAAGGTATCCAGTGGGCCTCACTCTTGCAGGCCCTGGCCTCTCATAACAAAACAGCCTCGCCTGGCCCACACCTCCGCATTACTGCATTGTCTAGAACCGGCTCAGGCCGGAGATCCATTGCCACCGTTCAGGAGACAGGCCGGAGGCTCACTGCCTTCGCCGCTTCCTTAGGGCAGCCTTTTTCCTTTCACCACTGCAGGATGGACCCCGACGAAACGTTTCGGCCCAACGGGCTGAAGCTCGTTCGCGGGGAGGCTTTGGTGTTCAATTGCATGCTCAACCTCCCGCATTTGCCCTACCGAGCACGCGATTCAGTTGCGTCGTTCTTGAACGGCGCGAAGGATTTGAGTCCCGTGCTGGTGACGATGGCAGAAGAGGACATTGGGCCCGTAGGAGTGGATGCTGGATTTGTGGGCCGATTCATGGACTCACTGCACCACTACTCGGCGTTTTATGATTCCCTTGAAGCCGGGTTCCCAATGGAAGGTCGGGCCCGGGCTTTGGTTGAACGGGTATTTCTTGGACCGAGAATAGCAGCGTCGTTGGGGCGGATATACCGAACAAGTGAGGGGAAGGAAGAAAGAGGGTCGTGGAGGGAATGGTTGTGTGGTATGGGGTTCAAGGGAGTACCTTTGAGCTCAGCCAATCAGAGCCAAGCGAAACTACTAATAAATTTGTTCAAGGACGGTTACAAATTGGAACAGTTAGGTTCCAATCAGTTAGTGTTGAGTTGGGAATCACGCCGTTTGTTTTCTACATCTATTTGGTCTTCTTCTTCCTCCTACTCTCAGATTGAACCATTGTAG 1542 0.5402 MEIDMLDIHNIEFSGYSTTTTPSSDENPAYTNWTHWSPLVNWEAIAAPYDDFHHLIDSIIDHHHATTPLHLTPDHDDEDDTTTANTADDESPPLPTTPTPTIAGEDETKGLRLVHLLMAAAESLTGATKSRDLARVILLRLKELVPFSSTSSSTGATNMERLAAHFTQALQGLLDGAGGGGAHNNHSNNNKQYNYWSHQTETLTAFQLLQDMSPYVKFAHFTANQAILEAIAHHRRAHIVDFDIMEGIQWASLLQALASHNKTASPGPHLRITALSRTGSGRRSIATVQETGRRLTAFAASLGQPFSFHHCRMDPDETFRPNGLKLVRGEALVFNCMLNLPHLPYRARDSVASFLNGAKDLSPVLVTMAEEDIGPVGVDAGFVGRFMDSLHHYSAFYDSLEAGFPMEGRARALVERVFLGPRIAASLGRIYRTSEGKEERGSWREWLCGMGFKGVPLSSANQSQAKLLINLFKDGYKLEQLGSNQLVLSWESRRLFSTSIWSSSSSYSQIEPL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00622 513 ProSiteProfiles GRAS family profile. 104 502 IPR005202 -
Adu08g00622 513 MobiDBLite consensus disorder prediction 69 105 - -
Adu08g00622 513 Pfam GRAS domain family 113 501 IPR005202 -
Adu08g00622 513 PANTHER SCARECROW-LIKE PROTEIN 26 4 503 IPR030028 -
Adu08g00622 513 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 503 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00622 Adu-Chr8 11147190 11148731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00622 142 505 GRAS Transcription Factor Family AT3G54220 35.135 7.96e-49 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu08g00622 GRAS 4.3e-95 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00622 - - aip:107608402 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00622 08 11147190 11148731 Adu08g00622 08 11147190 11148731 ECH