Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00621 ATGTCTGGACCTTCCGTCACTCAGAACGCCGCCTCGTCACTATTAGATTGTGCCACACACGTCGCCGCCGGAGAGAACTCTTGGGTGAATGCCTCTTCCCGCGCGATTCGAAGCGACGCCGACCACCGCAATCCTTTCTACTTTCTTTCCATCTCTCATTTCCACCTTCTCAATCCTTTCTACTTTCTTTCCATCTCGCTCTTGTTCGATCTCGATCTCGATCTCATCTCGATCTCGATCTCATCTCGATCTCGATCTCGCTCTTGCTCTCGCTCGATATCGATTCTCGATGGAGCCAGCAAGTTCAACTTCACCGTGCAGAATGACGGTGGTCAAGTCACGCTCAAGACCAAGATTGTTACTGCCAAGATCACTGTCACGCTCATTGACGAAGACCCGCTCGCGATCTACACCATTGATAAGGTTCTGCTTCCGAGGGAGCTTTTCAAGGCCCTGGCTCCGTCTCCTTCGCCCGCGCCCGCACCGGAGCCAGCCGCCGTGGACGCTCCTGCATCCCCGAAGAAAGAGGGAAAGAAGAAGAAGCAGAAGGCAGCCGACGCGCCGGCAGATGAGGAATCAGCGCCTGCGGATTCGCCCAGTGATGCCGCCGATGACAGCGCTGACGACGGTAACGGCGCTGTTAGGTTTGACGACGTCAGGGAGGAGAATGTTTATAATCCAGATTTCTACAACTGGAACAGAATCAAGATTAGGTACTGTAACGGATCATCATTTACTGGTGATGTGGAAGAAGTTGATCTAACAACCAATCTGCACTTTCGAGGAGCAAGAATTTTTGAAGCAGTCATTAAGCATTTACTTGCAAAAGGAATGGAGAATGCTAAAAATGGTATTCTATCTGGATGCTCTGCTGGAGGATTGGCTGCTATATTGAACTACGATCGCTTCAAATCCTTCCTACCAAATGGCGCTAGAGTGAAATGCGTGCCAGATGCCGGCTATTTTATCCATATGGATCAGCAAAGTATTTGTCTAAGTCCTGCACTTCAAAATATGGTGCTGGCTTGGTTCTGCTGGGGATATGGGTGCCGGAAAATCCAGCCTCGTTTTGCCGGAATGGTCCCAGTTCAATGGGGAGTGTATGTTTACAAGGAAGAAACAAGCATGAAAGGTATCTGCTTTAGTGGGTCGCAACAATTCGGGTTGGAGAATATACCTCGTAGTCCAGGGAGTTTGACAAAGAAGAGATTATCTTCTGCTGAGGACATGTTGCAATATAATGAGTTGACAAGATCTGTCAGTGTTGGAGCATATGCCTCCAAAAGTTTATCTTGCAACAGCTGGTTGGCTAATACATACAAATCAATTGTCTTGTACAATCCAATATTTAAGTTGGTAAATCCGAAAGGAGTCAAGCAAAATTTGTGGCTTTTGAACAATTATATGGGGAATTGTTTGGATAAGGATCTGTAG 1434 0.4763 MSGPSVTQNAASSLLDCATHVAAGENSWVNASSRAIRSDADHRNPFYFLSISHFHLLNPFYFLSISLLFDLDLDLISISISSRSRSRSCSRSISILDGASKFNFTVQNDGGQVTLKTKIVTAKITVTLIDEDPLAIYTIDKVLLPRELFKALAPSPSPAPAPEPAAVDAPASPKKEGKKKKQKAADAPADEESAPADSPSDAADDSADDGNGAVRFDDVREENVYNPDFYNWNRIKIRYCNGSSFTGDVEEVDLTTNLHFRGARIFEAVIKHLLAKGMENAKNGILSGCSAGGLAAILNYDRFKSFLPNGARVKCVPDAGYFIHMDQQSICLSPALQNMVLAWFCWGYGCRKIQPRFAGMVPVQWGVYVYKEETSMKGICFSGSQQFGLENIPRSPGSLTKKRLSSAEDMLQYNELTRSVSVGAYASKSLSCNSWLANTYKSIVLYNPIFKLVNPKGVKQNLWLLNNYMGNCLDKDL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00621 477 PANTHER NOTUM-RELATED 221 328 IPR004963 GO:0016787
Adu08g00621 477 Pfam Pectinacetylesterase 223 329 IPR004963 GO:0016787
Adu08g00621 477 MobiDBLite consensus disorder prediction 154 215 - -
Adu08g00621 477 PANTHER PECTIN ACETYLESTERASE 221 328 - -
Adu08g00621 477 MobiDBLite consensus disorder prediction 172 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00621 Adu-Chr8 11137252 11142040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00621 226 324 Carbohydrate Esterase AT5G45280 73.737 3.51e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00621 K19882 - gmx:100776802 174.096