Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00591 ATGGAAGGTGATGATGGAAAACAACCAACCCACAAAGAACCATGCAATAATAATAGTAGTAACAATAATGAATTATTTGAGCAAGAGAACTTTGATTATATTCTTGCAATTAGCTTGCAAGAACAAGAGGGAGCAACATACACAACCCTAGCAACCATGGAAAGTGACGACGATGAAGAAGACGACGACGAAGATGATTATTCCTCTTTGGGCGATGAAGATGGCGATTCTGAGTATTATTTAGAAAGCCAAGACTTTGAGGAGTCAGAAAGTCAGTTCCTTGAAGGTGAAGGAAGCAACTACGACGACGATGACGAGGGAGAAGAAGAAGAGATGGAAGAAGATGAAATTGATCCAGATGAAATGTCCTATGAAGAGTTGATTGAGTTGGGAGAAATCATAGGAGAAGAGAATAGAGGATTATCAGAAAATGAAGTGTCTTCTTGCTTATACCCTTACACTTGCAAATCTAATAGTGATGATGAAAGAATCGATCGGTGTGTAGTTTGTCAGATAGAATATGAAGAAGGTGAATCAATGGTGGCACTGGAATGTAAGCACCCTTTTCATGAAGATTGCATAACCACATGGCTTCAGATTAAGAAGGTTTGTCCAATTTGTGGCAATGAAGTTTCAACCAATAATAATAATACCAACAAGATCATGCCTAAGAATGAATAA 681 0.3803 MEGDDGKQPTHKEPCNNNSSNNNELFEQENFDYILAISLQEQEGATYTTLATMESDDDEEDDDEDDYSSLGDEDGDSEYYLESQDFEESESQFLEGEGSNYDDDDEGEEEEMEEDEIDPDEMSYEELIELGEIIGEENRGLSENEVSSCLYPYTCKSNSDDERIDRCVVCQIEYEEGESMVALECKHPFHEDCITTWLQIKKVCPICGNEVSTNNNNTNKIMPKNE 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00591 226 ProSiteProfiles Zinc finger RING-type profile. 167 207 IPR001841 -
Adu08g00591 226 SUPERFAMILY RING/U-box 166 214 - -
Adu08g00591 226 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 21 216 IPR033276 GO:0004842|GO:0016567|GO:0046621
Adu08g00591 226 SMART ring_2 167 207 IPR001841 -
Adu08g00591 226 MobiDBLite consensus disorder prediction 46 122 - -
Adu08g00591 226 Pfam Ring finger domain 166 207 IPR001841 -
Adu08g00591 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 224 IPR013083 -
Adu08g00591 226 MobiDBLite consensus disorder prediction 1 26 - -
Adu08g00591 226 MobiDBLite consensus disorder prediction 53 122 - -
Adu08g00591 226 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED-LIKE 21 216 - -
Adu08g00591 226 MobiDBLite consensus disorder prediction 12 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00591 Adu-Chr8 10739695 10740627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00591 114 211 C3H Transcription Factor Family AT3G63530 48.000 6.16e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00591 K19045 - gmx:100526881 190.274