Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00589 ATGGCGGAGACTATCTCTCCCATGGAAATCGACGGCAACGAAACCCTTTTCCCTTCAAGTACCGACAAGGGTAAGAGGGTCTTCGTCGCCGGGAACAACTCCGGTAACGGCAAGGCCACTCCGTGGGTCGAGAAGCTGACTACTGAGAACAGATTGCCACATCTTCTACTATATGGTCCACCTGGCACGGGCAAAACTTCGACTATTCTTGCCGTGGCACGCAAACTCTATGGTGCGCAATACCACAAAATGATTTTGGAGCTCAATGCCTCTGATGACAGAGGAATTGATGTTGTACGCCAGCAGATTCAAGATTTTGCTAGCACCCAGAGCTTATCATTTGGTGCAAAGGCCTCAGTGAAATTGGTCTTGCTAGATGAAGCAGATGCCATGACAAAGGATGCCCAATTTGCATTACGTAGAGTGATTGAGAAATATACAAAAAGTACAAGGTTTGCACTTATCTGCAATCATGTAAATAAGATTATCCCTGCACTACAATCAAGGTGCACTCGATTTCGGTTTGCCCCTCTTGATGAAGTCCATGTCACTGATAGACTGAAGCATGTTATTAAAGCTGAAGGGCTTGATGTTGAAGACAGTGGCTTAGCTGCGCTTGTTCGGCTTAGCAATGGTGATATGAGAAAGGCTTTGAATATTCTTCAGTCAACGCATATGGCTTCTCAGCAGATAACAGAAGAAGCTGTATACCTGTGCACTGGAAATCCATTGCCCAAAGATATTGAGCAAATATCTTATTGGCTGCTAAATGAACAATTTTCAGAGAGTTTTAAAAGAATACATGAAATCAAGACAAGGAAAGGATTGGCCCTGGTAGATATTGTGAGAGAAGTGACAATGTGA 864 0.4398 MAETISPMEIDGNETLFPSSTDKGKRVFVAGNNSGNGKATPWVEKLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHKMILELNASDDRGIDVVRQQIQDFASTQSLSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDEVHVTDRLKHVIKAEGLDVEDSGLAALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQFSESFKRIHEIKTRKGLALVDIVREVTM 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00589 287 Gene3D - 180 242 - -
Adu08g00589 287 PANTHER REPLICATION FACTOR C SUBUNIT 5 43 286 - -
Adu08g00589 287 CDD HLD_clamp_RFC 178 240 - -
Adu08g00589 287 SUPERFAMILY post-AAA+ oligomerization domain-like 243 285 IPR008921 GO:0003677|GO:0006260
Adu08g00589 287 SMART AAA_5 51 181 IPR003593 -
Adu08g00589 287 Pfam ATPase family associated with various cellular activities (AAA) 55 176 IPR003959 GO:0005524|GO:0016887
Adu08g00589 287 Gene3D - 29 177 IPR027417 -
Adu08g00589 287 Gene3D - 243 287 - -
Adu08g00589 287 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 43 286 - -
Adu08g00589 287 CDD AAA 42 177 - -
Adu08g00589 287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 227 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00589 Adu-Chr8 10667806 10671721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00589 1 287 Core DNA Replication Machinery Family AT1G77470 71.835 5.93e-154 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00589 K10756 - gmx:100805231 479.944