Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00580 ATGGAGCTTGTTGATACTACAAAGATTCAACAACAACATTTTCATGTCTTGGCAGTTGATGATAGTGTCATTGATAGAAAACTCTTGGAGAGGCTCCTTAGAGATTCTTCATGCAAAGTTACATGTGTGGACTCTGGTGACAAGGCTTTGAAATATCTTGGGCTTGTTGATGATGATGATGAACATCAAAATAATAATAATAATAATAGTTCTTCTTCATCAACCTCTTCAGAATCTTCATCATTTTCTAATTCTTCTCCTTCTCCTCACCCATTACAACAAGAGGGAATGAAAGTGAATTTGATCATGACGGATTATTGCATGCCTGGGATGAGTGGCTATGATTTACTTAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTTGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCACCATGTGCTTGGAAGGAGGGGCAGAAGAGTTTCTATTGAAACCTCTTCAGTCAGAAGATTTAAAGAAGCTTCAACCCTATTTTCTGAAACCACTTGATAATAATTCAAGTGAAGAAGGAGAATCTGCTAATAGTTCTATAGATTCAGACAATGAAAATAATCTCATCAGCAACAATAATAATATTAACAATAATAATAATAATAATAATAACAATAATAATAATAATAATAATAATAGTATTAGCAAAAGGAAGGCTATGTCTCCTGATGAGCCTCCAGAAAGATCAAGACCCAAAATGAAAGGGTTGGAAGTGGTGTAA 747 0.344 MELVDTTKIQQQHFHVLAVDDSVIDRKLLERLLRDSSCKVTCVDSGDKALKYLGLVDDDDEHQNNNNNNSSSSSTSSESSSFSNSSPSPHPLQQEGMKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRITMCLEGGAEEFLLKPLQSEDLKKLQPYFLKPLDNNSSEEGESANSSIDSDNENNLISNNNNINNNNNNNNNNNNNNNNNSISKRKAMSPDEPPERSRPKMKGLEVV 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00580 248 MobiDBLite consensus disorder prediction 57 93 - -
Adu08g00580 248 MobiDBLite consensus disorder prediction 174 248 - -
Adu08g00580 248 SUPERFAMILY CheY-like 14 166 IPR011006 -
Adu08g00580 248 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 8 247 - -
Adu08g00580 248 Gene3D - 15 212 - -
Adu08g00580 248 CDD REC_typeA_ARR 16 166 - -
Adu08g00580 248 Pfam Response regulator receiver domain 57 165 IPR001789 GO:0000160
Adu08g00580 248 MobiDBLite consensus disorder prediction 174 227 - -
Adu08g00580 248 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 247 IPR045279 GO:0009736
Adu08g00580 248 SMART REC_2 14 167 IPR001789 GO:0000160
Adu08g00580 248 ProSiteProfiles Response regulatory domain profile. 15 171 IPR001789 GO:0000160
Adu08g00580 248 MobiDBLite consensus disorder prediction 65 93 - -
Adu08g00580 248 MobiDBLite consensus disorder prediction 229 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00580 Adu-Chr8 10424673 10427391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00580 11 245 Response Regulator Gene Family AT3G57040 43.496 1.26e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu08g00580 Response_reg 6.6e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00580 K14492 - gmx:100801334 277.33