Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00566 ATGGCAAGCGTTCTTAGACAGCAGCAACAGCCAGCAGGGAGTGGTGGTAACAACCGCGTGGTTGCCGTAAGTGCCACACCTCCCAATAATATCCTCCATACTCATGCTGATGCCTCCTCAAATCACGAGAAAAAAGGGTGGAAGAAGTTTCTGTCATTTATAGGGCCTGGTTTTCTAGTCTCTCTCGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTCCAAGCTGGAGCTAATCACCGATATGAGCTACTGTGGGTGATACTTATCGGATTGATATTTGCTCTTATTATTCAGTCATTAGCGGCAAATCTTGGCGTAAGCACAGGGAAACACCTTTCAGAGATATGCAAAGCGGAGTATCCAAGACTCGTTAGGTACTGCTTATGGTTATTAGCTGAGCTTGCTGTCATAGCCGCAGACATTCCAGAAGTGATTGGAACGGCGTTTGCACTGAACATACTATTCCACATCCCAGTATGGGGAGGAGTTCTAGTGACTGGGTGCAGCACTCTGTTGCTTCTTGGTCTCCAGAGATTTGGGGTAAGGAAGTTGGAGTTGCTGATATCAACGCTGGTATTTGTGATGGCAGCATGTTTCTTTGGAGAAATGAGTTACGTAAAACCACCAGCGTCTGGTGTCATAAAGGGCATGTTTATTCCCAAACTCAGTGGTCAAGGTGCCACTGCCGACGCCATTGCCCTTTTAGGTGCCCTTGTCATGCCGCACAACCTCTTCCTCCACTCTGCTCTGGTGCTGTCTAGGAAAGTACCTAATACAGTTCGTGGCATCAATGACGCGTGTAAATATTTTCTGATAGAGAGTGGGTTCGCACTGTTTGTGGCATTTCTGATCAACGTTGCAGTTATTTCTGTGTCTGGCACTGTTTGCTCAGCTTCAAATCTTTCTTCGGCAAACACTGATCATTGCACCGATCTCACCCTTAACTCTGCTTCCTTTCTTCTCAAGAATGTGTTGGGAAGGTCTAGCTCAACGATTTATGCAATAGCACTATTAGCCTCAGGACAAAGTTCCGCTATTACTGGAACCTATGCAGGACAGTACATTATGCAGGGTTTCTTAGACTTGAAGATGAAAAGATGGATTAGGAACTTGATGACTAGGACCATTGCCATAGCACCAAGCCTTGTTGTCTCCATTATTGGTGGCTCCTCCGGCGCCGGTCGACTAATCGTCATCGCATCGATGATACTTTCTTTTGAGCTTCCGTTTGCTTTAATTCCACTCCTTAAGTTTAGTAGCAGCAGTACCAAGATGGGACCTCACAAGAACTCTATGATAATAATTGTCATCTCATGGATCCTAGGATTGGGAATCATAGGCATCAATGTGTACTACCTCATCACTGCCTTCGTGGATTGGCTAATTCATAATAGTTTGCCAAAGGTGGGAAATGTGTTCATTGGGATCATAGTGTTTCCTCTGATGGCAATCTATGTCGGCTCAGTTATATACCTAACATTCAGAAAAGACACTGTTCAGACATATATTGAGACCAAGGATAACACAGCAATGCAAACCCATGTGGAAAAGGGGTTCATGAATTCTAATGGTGAGTTAGAGTTGAGCCATGGCCCTATCAGAGAAGATTTAGCTGATATCCCACTACCGGAATAA 1638 0.4487 MASVLRQQQQPAGSGGNNRVVAVSATPPNNILHTHADASSNHEKKGWKKFLSFIGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIGLIFALIIQSLAANLGVSTGKHLSEICKAEYPRLVRYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWGGVLVTGCSTLLLLGLQRFGVRKLELLISTLVFVMAACFFGEMSYVKPPASGVIKGMFIPKLSGQGATADAIALLGALVMPHNLFLHSALVLSRKVPNTVRGINDACKYFLIESGFALFVAFLINVAVISVSGTVCSASNLSSANTDHCTDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFLDLKMKRWIRNLMTRTIAIAPSLVVSIIGGSSGAGRLIVIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMIIIVISWILGLGIIGINVYYLITAFVDWLIHNSLPKVGNVFIGIIVFPLMAIYVGSVIYLTFRKDTVQTYIETKDNTAMQTHVEKGFMNSNGELELSHGPIREDLADIPLPE 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00566 545 PRINTS Natural resistance-associated macrophage protein signature 129 155 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu08g00566 545 PRINTS Natural resistance-associated macrophage protein signature 157 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu08g00566 545 PRINTS Natural resistance-associated macrophage protein signature 182 203 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu08g00566 545 PRINTS Natural resistance-associated macrophage protein signature 232 255 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu08g00566 545 PRINTS Natural resistance-associated macrophage protein signature 342 361 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu08g00566 545 PRINTS Natural resistance-associated macrophage protein signature 370 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu08g00566 545 PRINTS Natural resistance-associated macrophage protein signature 402 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu08g00566 545 MobiDBLite consensus disorder prediction 1 20 - -
Adu08g00566 545 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 48 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu08g00566 545 PANTHER METAL TRANSPORTER NRAMP5 40 545 - -
Adu08g00566 545 Pfam Natural resistance-associated macrophage protein 71 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu08g00566 545 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 40 545 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu08g00566 545 Hamap Divalent metal cation transporter MntH [mntH]. 36 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00566 Adu-Chr8 10195123 10200788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00566 14 545 Inorganic Solute Cotransporters AT1G15960 58.209 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00566 K21398 - gmx:100787785 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00566 08 10195123 10200788 Adu08g00566 08 10195123 10200788 ECH