Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00549 ATGGGTTCTTGTGGGGATTCAGCTATGGTTGATGATGGAATATCAGGTGGGTCTGTTATTGAGCAGCATTTGTGCTCGGAGATTCCCGTGCATTCGGATCATTTGCAGAAACAGTTGTGTTCAGAAGGAGCTTGTAGTGTGTTGTACTCTGATGAGCTTAGCAGCTTGAAGGATGGCAGTGAGGGCCCTGAGTGTTCTACAAGCGGCAGTGATGTTCCGGACAAGTGTGGAGATGTCTTGCCAAATGAATGTGGAAATGCTGATATGTTGCAATTGGAGAACACCTCTGAGCATGATTGTCAGAATCATTCAAGGATATGTTGTGGGAACAACGAGGGTTCAGGTCTAAAAACTAGGGGGCTGTGTTCGGAAGGAAATTTTCAAGATGAAGGCGACACAGACATTCCATCGGAGTCCATAACTGTGACTGGGTTGCAGGAGCATTGTGTTCAACACGTTGTGCAGAAGGATGAGAAGCTCAATGTATTCCCCTCAGTGAATGATGATTCAGCTGTCATGGGAGGCAAAAATGATGACTCCAGTGTACTTGTGGATGCTTTGGATTGTGTGCATGATTTCAGACATTCTGAAATGTCCTTGGAATCAGAACCCACGACTGACTTGCTAGTTGGTTGTGACCACAAAAATGAGCAGGGGGACATTGTGAGAAATGCAGATCCATTGTCAATGGGTGTGGAAAAATGTGATGCTTTTGATGGGATGGAATCCGATGCTTGCAGGCAGGCATCTCCTTTGCAGATGCAGGCTTTGGAAGTTCCAACAACTGTATGTACAGAGGAAGATAGCAGACGTGGTCAGCTATGTGATGTTAAATATGGTGATGATTGGAATAGTAGTATTGATGAAAAGATTAAAGCTTTTGTAGATACGGAAAACATTGTTGATTCACATGTCCAAGTATTGTCCTCACCAGGCTGTCATAGGACCTTGGAGAGTTCACCTGTAGTTGATTCCCCTCCGGAGACTTCAGCGTTGGTCCAGGGTAATGTAATGAAGAATGATATCTTGCAAATAGATGAGAAGTTGTGTAAATTGAAGGACTCTCACTCAGAAGAAACTACCAACTATGCTCCTAGGAAACCTTTATATGCTGATTCAGATCAGCCCTCCATTGTTTTAGTCACCGATACCTCTTTGAAGGTCGCACATGATCTGCTTCCTAAGGGTGGTGTTGTTTCTGTCAATAACAGTAGTGCTAGGGACACTGTTGGACAGACAGATAATGATGGAAAAGATACTGTGGAAGCTGATTTTTTTGCTCAAAGCATCCTATTGCCGTCTCAAAGGAATAGTAGAAGAAATAAAATTGGTCGTAAGACACAAACAAAAAAAGCCTCAAGAAAATGCAACAAAGCTGATTTGACACATCCAGGAGGAGATATGAAGATAAACTTAGAGGTTGCTAGAAAGAAAAGAAGTTCTTTCTCCAAGCCGGCACGATCTTCTATCTGGGGATTGCTTGGGAGCATTGAACAATATTTTGAGCAAGATAATGAGCTTGGGATTAGTAAAGCCATGTGCCAAGAATTGGGGAAGTCTAGAAGCAAGCGTCAAACAGGAAAAGCATTTAAGAACAGTGCAAGTTCTAGTTCTTCAAATGCAGGGCAGAAATGTTCAGTTCCAACAACTCGGGTCCGTCTAAAGATCAAGTTCGGGAAAGAAATTGATCTAAGTAGTTCAAATATTTTGATTCCAGAAATTGGCAATGCCTTTAATCCTGCTTCTGACATGGGGACTGGTTCAGGTTCTCAGAAAGTTGGAAGCAATGCGGAAGACAAATCTTTGGGACCGGTGTCCTTGGGCAATTTAGAAACCTTCAAAAGCAACCTCAAGAAGGATGATCTTGTACTAAATGCGCAAATTGCAACAAACCACTTAGAAAGTACTGCAAAAATTGAGAAGTCAAATGGGGATGTAGAGGCAAAGTTTCTTACAAATCCTCTAGAAAAGGTGGTAGAACCATTGATTGAACCAATCATTAATATGGATCCTGGAACTTCACCTGATTCAGAAGTCATCAATTCAGTTCCAGAAGTTCAAGTTGGAGAAAGACATCAAGAAGATATGCATCATGCTCTTTTAGGTCCTCCTTTGGATTTCAATTCTAATTTGCATATTACTATTAGCAAGAAGGGGAAGAAAAAAGACAAACATATTTCTTCAAGTGATTGTATTACTGAAGTTGGATCACATGGGCGACATAGAAGTAATAAAGCAAAACAATCAAAGAATCACAGATGTAAGAAGAATTCTAGTAATACAGTTAGCTTTTTAGAATTGCCTGCTTCCACTGAGATAAATGCTTCAAGCAAATCTATCAGTAGTGAAGAATTTCCGACAGAACCATTACCCCTTTCTGGTGAGAGTGAACTTGGAGACTCTGCTGAAGCTTTGAAGGTCCAAGGGTGCAAGCCATCTGTTAACCACAGGCCATCAGAACCCCAGGGTTCTGAGAATTTGCCGCCTTGTGTAAGATATTTGGGGCGTAAACTACCTAAAAGCCTTATGAGTGTTAAATTTAGCAAGGCCAAGTCTAAAGCTTCTGACTCAACAAAGAAAAAGATCACTTGTAGACACAAGGAGAAACAGAGAAGGCCAAATAGTAAAAGCGAAGTCAAGGGAAAAGGTGGCCCGCATAAAGTTATGGCAGAAGTGGAGGATCACATACATACAGCAACCAGCACAGTTGGAAATGGCAAATTGGATGCTGATCAAAGATTTAATGCTGATGAAAACAGAGTATCAGTTAATGTATCTAATTTGAACATATTGCCCACCATTGATTCGGGAGAGCAGCATAAATCACCACATAATGCATGGGTGCGTTGTGATGATTGTCACAAGTGGCGGCGCATTCCAGCTGTGCTTGCTGACCTGATTGATGAGACAAACTGCACCTGGACATGCAAGGATAGCAAGGATAAAGACTTTGCTGATTGTGCTATCCCTCAGGAAAAGTCAAATGCAGAGATTAATGCAGAATTGGGATTATCGGATGAAGAAGATGCTTACGAAGACTCCAGAAATTATAAGGAATTGGAATTCCAACAGCCATTGGTTTCCCAGGAGTCGACTTTCACCCAAGTCCTTTCCAATGAGTTTCTACATCGTAGCCGTAAAACACAAACTATTGATGAGATAATGGTCTGCCATTGCAAACAACCTCAAGTAGGCAAGTTAGGCTGTGGGGATGAATGCCTAAACCGGATGCTAAACATTGAATGCGTTCAAGGAACCTGCCCATGTGGGGATTATTGTTCCAACCAGCAGTTCCAAAAACGCAAGTATGCCAGCTTGAAGTGGTTTAAATGTGGGAAAAAAGGTTATGGACTGAAGGCACTTGAGAATATAGCCCAAGGCCAGTTTCTCATTGAATATGTTGGGGAGGTGCTTGATACTCATGCTTATGAGGCACGGCAAAGAGAGTATGCTTTGAAGGGTCATAGACATTTCTATTTTATGACCTTGAATGGAAGTGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGCCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGAACAGAAAAGTGGATGGTGAATGGGGAAATATGTATTGGACTGTTCGCATTGAGGGATATTAAGCAGGATGAAGAAGTGACATTTGATTACAACTATGTAAGGGTTTTCGGTGCTGCTGCCAAAAAATGCTATTGTGGCTCAATTAATTGTCGAGGTTATATAGGTGGTGGTGATCCGTTAAATTCCGATTTGATAGTTCAAGGTGATTCTGATGAAGAATTTCCAGAACCTGTTATGCTTAATGATGATGGTGTAATTGAAAATGGGTTGCTTTCACGCAAGTTTACTATTGCGATAGACACAGATAATACTCCAGAGAAGGAGAGTTCTATGAACCCTTCCTCTGCTGTTGATTTGTTGCACAGCTCCATTGAAGAAAATTCAAAGGCCAAGGTACCATCTTCTGTTCGCGTTGAAGAAATTTCTCAACTAGTGGAGAATAGAGAAAGTAAAACCATGCCTGCTATGCAACAAGGGCATGCAATCGATCTTACGGACAAAACTACCTCCATTCAGAAAGATGAGAAACTTTCTTCCCTTGCACCTGTCAGAAAAGTCTTATTGAATGCTACCATCAGTAATAAGGAATTTAAGCCTGAAATAGTCAAGGCTCCTAAACTGGTTAGTTCTGTTAAAAGGGGAAAAGTTTGTGCTAATCCTCCAAACGGCCTCAAAATTGAGACAACAGTGAACCGATTGCAGTTGTCATCTGGGAAACTGAAAAAAGTTGTTGAAGGTTCTTCTAATGCAAGATTTGAAGCAGTCCAGGAGAAGCTTACGGAATTACTCGATGGAGATGGAGGAATAAGCAAAAGAAAAGATGCCACCAAAGGTTACTTGAAACTCTTGCTTCTCACTGTGGCATCAGGTGATAGGAGCAGCGGTGAAGCTATTCAAAGCAATCGAGATCTCTCGATGATCCTTGATGCCCTTCTAAAAACGAAATCTAGAGCAGTGCTAAATGATATAATTAACAAAAATGGTTTACAGATGTTACATAAAATCATGAAGCAGTACAGGCGGGATTTCAAAAAAATTCCAATATTACGAAAGCTGCTTAAGGTGCTAGAGTATCTGGCTGTGGGCAAGATACTGACATTTGAACATATCAATGGTGGTCCCCCATGTCATGGAATGGAGAGCTTTAGGGAATCAATGCTGTCTCTGACAGAGCATGATGACAAACAGGTACATCAAATTGCTCGAAGCTTCCGAGACAGATGGATTCCTAGGGCATCCAGAAAACATGGATATATGGACAGGGATGATAATAGAATGGAATCTCATAGAAGTTACAACAGTAACAGATTTTCATCATCACACAATCATAGGCATGAACAGGACTCTAGACCTACAGAAGCAGTGGATTGTGTTCCGATGTCAACATCCGTGGAAACTTCAGCTGATGCTGGTGCACCTGAGGGATCCTCCGCGCCCTCTCTAGATGGGGTTGATGTCAAAGGGACAAAAAAACGAAAGCGCAAAAGCCGGTGGGATCAACCAGCAGAGACAAATTCTTATTCCGATGCAGCAGTTATTGGTTCTACTGATGGAAGCCAGAACATTCATGAGGATGTTCCACCAGGATTTTCTTGTCCCGTAGGTGCTGGTGATCTTGCTCCGCGAAATGGAGTCCATTCTGGAAGTGCCCCTGACTTGGTTTTTGGTCAGCCAAAGGAGAAATTTAACTCTCGCTTGCCTGTCTCGTATGGAATCCCTTGCTCTGTTGTCAAGCAGTTCGGAACACCTCATGCTGAGATCTCGGGTAGTTGGGTCACTGCACCTGGAATGCCTTTCAACCCATTTCCTCCATTACCACCATATCCACGGGATCAAAGAGACTGTTTACCTTCCAATACTTCCAGCGCTATGGCAATTGACCAGCCTTCTGAAATCAAACAGTCAGATGGTAGTGGCCTAGTTAACAGTTGCGCAGACGATACTGTTCGCAGCACAACTGGCACTAACTCTGATGACATGAATCATACAGATGAGGAGAATCGAAACATAACTAAGCGATTGAAGGACGATGACCTGGGAAGGAGGTACTTTAGACAGCAGAAGTGGAACAATTCGAAAATACATCGACCTTGGTTCCGGAGGGATGCATGGAAATGCAATAATAGGAACAACACCAGTGGTGGTGATATGTGCGGTATGGGTGTAGGAAATGTACAATCTGAAGTTACAAGAAGCTCAGAGGATGCAATTTGTAGAGATGAGAAAGGTGGCAATAATATTTGTTAG 5817 0.4217 MGSCGDSAMVDDGISGGSVIEQHLCSEIPVHSDHLQKQLCSEGACSVLYSDELSSLKDGSEGPECSTSGSDVPDKCGDVLPNECGNADMLQLENTSEHDCQNHSRICCGNNEGSGLKTRGLCSEGNFQDEGDTDIPSESITVTGLQEHCVQHVVQKDEKLNVFPSVNDDSAVMGGKNDDSSVLVDALDCVHDFRHSEMSLESEPTTDLLVGCDHKNEQGDIVRNADPLSMGVEKCDAFDGMESDACRQASPLQMQALEVPTTVCTEEDSRRGQLCDVKYGDDWNSSIDEKIKAFVDTENIVDSHVQVLSSPGCHRTLESSPVVDSPPETSALVQGNVMKNDILQIDEKLCKLKDSHSEETTNYAPRKPLYADSDQPSIVLVTDTSLKVAHDLLPKGGVVSVNNSSARDTVGQTDNDGKDTVEADFFAQSILLPSQRNSRRNKIGRKTQTKKASRKCNKADLTHPGGDMKINLEVARKKRSSFSKPARSSIWGLLGSIEQYFEQDNELGISKAMCQELGKSRSKRQTGKAFKNSASSSSSNAGQKCSVPTTRVRLKIKFGKEIDLSSSNILIPEIGNAFNPASDMGTGSGSQKVGSNAEDKSLGPVSLGNLETFKSNLKKDDLVLNAQIATNHLESTAKIEKSNGDVEAKFLTNPLEKVVEPLIEPIINMDPGTSPDSEVINSVPEVQVGERHQEDMHHALLGPPLDFNSNLHITISKKGKKKDKHISSSDCITEVGSHGRHRSNKAKQSKNHRCKKNSSNTVSFLELPASTEINASSKSISSEEFPTEPLPLSGESELGDSAEALKVQGCKPSVNHRPSEPQGSENLPPCVRYLGRKLPKSLMSVKFSKAKSKASDSTKKKITCRHKEKQRRPNSKSEVKGKGGPHKVMAEVEDHIHTATSTVGNGKLDADQRFNADENRVSVNVSNLNILPTIDSGEQHKSPHNAWVRCDDCHKWRRIPAVLADLIDETNCTWTCKDSKDKDFADCAIPQEKSNAEINAELGLSDEEDAYEDSRNYKELEFQQPLVSQESTFTQVLSNEFLHRSRKTQTIDEIMVCHCKQPQVGKLGCGDECLNRMLNIECVQGTCPCGDYCSNQQFQKRKYASLKWFKCGKKGYGLKALENIAQGQFLIEYVGEVLDTHAYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQDEEVTFDYNYVRVFGAAAKKCYCGSINCRGYIGGGDPLNSDLIVQGDSDEEFPEPVMLNDDGVIENGLLSRKFTIAIDTDNTPEKESSMNPSSAVDLLHSSIEENSKAKVPSSVRVEEISQLVENRESKTMPAMQQGHAIDLTDKTTSIQKDEKLSSLAPVRKVLLNATISNKEFKPEIVKAPKLVSSVKRGKVCANPPNGLKIETTVNRLQLSSGKLKKVVEGSSNARFEAVQEKLTELLDGDGGISKRKDATKGYLKLLLLTVASGDRSSGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHKIMKQYRRDFKKIPILRKLLKVLEYLAVGKILTFEHINGGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWIPRASRKHGYMDRDDNRMESHRSYNSNRFSSSHNHRHEQDSRPTEAVDCVPMSTSVETSADAGAPEGSSAPSLDGVDVKGTKKRKRKSRWDQPAETNSYSDAAVIGSTDGSQNIHEDVPPGFSCPVGAGDLAPRNGVHSGSAPDLVFGQPKEKFNSRLPVSYGIPCSVVKQFGTPHAEISGSWVTAPGMPFNPFPPLPPYPRDQRDCLPSNTSSAMAIDQPSEIKQSDGSGLVNSCADDTVRSTTGTNSDDMNHTDEENRNITKRLKDDDLGRRYFRQQKWNNSKIHRPWFRRDAWKCNNRNNTSGGDMCGMGVGNVQSEVTRSSEDAICRDEKGGNNIC 1938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00549 1938 ProSiteProfiles Post-SET domain profile. 1229 1245 IPR003616 -
Adu08g00549 1938 Pfam AWS domain 1067 1101 IPR006560 GO:0005634|GO:0018024
Adu08g00549 1938 MobiDBLite consensus disorder prediction 1821 1859 - -
Adu08g00549 1938 MobiDBLite consensus disorder prediction 438 464 - -
Adu08g00549 1938 MobiDBLite consensus disorder prediction 527 546 - -
Adu08g00549 1938 SMART set_7 1104 1227 IPR001214 GO:0005515
Adu08g00549 1938 MobiDBLite consensus disorder prediction 811 831 - -
Adu08g00549 1938 SUPERFAMILY SET domain 1043 1242 IPR046341 -
Adu08g00549 1938 ProSiteProfiles SET domain profile. 1104 1221 IPR001214 GO:0005515
Adu08g00549 1938 Gene3D SET domain 999 1252 IPR046341 -
Adu08g00549 1938 SMART PostSET_3 1229 1245 IPR003616 -
Adu08g00549 1938 MobiDBLite consensus disorder prediction 1608 1714 - -
Adu08g00549 1938 Pfam CW-type Zinc Finger 947 993 IPR011124 GO:0008270
Adu08g00549 1938 MobiDBLite consensus disorder prediction 846 885 - -
Adu08g00549 1938 MobiDBLite consensus disorder prediction 518 546 - -
Adu08g00549 1938 CDD SET_SETD2 1103 1245 IPR044437 GO:0010452|GO:0046975
Adu08g00549 1938 Pfam SET domain 1115 1221 IPR001214 GO:0005515
Adu08g00549 1938 ProSiteProfiles AWS domain profile. 1052 1102 IPR006560 GO:0005634|GO:0018024
Adu08g00549 1938 ProSiteProfiles Zinc finger CW-type profile. 941 995 IPR011124 GO:0008270
Adu08g00549 1938 SMART shorttest3 1052 1103 IPR006560 GO:0005634|GO:0018024
Adu08g00549 1938 Gene3D - 937 998 - -
Adu08g00549 1938 MobiDBLite consensus disorder prediction 775 796 - -
Adu08g00549 1938 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC 434 1864 - -
Adu08g00549 1938 MobiDBLite consensus disorder prediction 723 741 - -
Adu08g00549 1938 MobiDBLite consensus disorder prediction 718 759 - -
Adu08g00549 1938 MobiDBLite consensus disorder prediction 1691 1712 - -
Adu08g00549 1938 MobiDBLite consensus disorder prediction 871 885 - -
Adu08g00549 1938 MobiDBLite consensus disorder prediction 1821 1848 - -
Adu08g00549 1938 PANTHER SET DOMAIN PROTEINS 434 1864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00549 Adu-Chr8 9918124 9931516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00549 1087 1244 C2H2 Transcription Factor Family AT2G23740 33.702 1.40e-20 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu08g00549 SET 6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00549 - - adu:107460691 3815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00549 08 9918124 9931516 Adu08g00549 08 9918124 9931516 ECH