Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00546 ATGGAAGTTTTTTCAGGTCACAGAAATGGTTTGCTTGGTTCAATTCACTGGAAAATCAGTAAGAGTACAAAAGTGCTAAGTGATGAGAGTGCAGAGAGTGATGCTGGCAAGAGTACTGGCCAATTTTCCGATCACAGTTTGGCGAAGATTTTAATGGATACTACTGAGTTTGATAGAAAAGATAGCTGCTCGGTTTGTGATCCAATCCTGGCATTGCCGCCTCCAGACTCTTGCCACCAATCTGCAGAAGAAGAATCTTGCAGTGATCGTGGTTGTGATAATTCCTTGGCTATAGTGCCTGTTCCGACCATGGATGCCGCACCACCTGAATTGAAACCAGGCTGGCCACTACTTCACCAGAGAATCTCATCAGAAACTCAGTTTCCTGATAGACTATCGGCACGCCAGATCTCTGTGGTCCAGTGGGCAATGAGGTTGCCTAGTAGGAATCTTTCATATGCTTCGGATCAAGATCGTAAGCCTCAAGATGAATCTGTGCCTTTGGATAGTGAAACTGGTGCTGTTGTTCCAGTAGATTATGGAATAGTGACTGTTTCTTTGCCTGAACCGAACTCAAAAAGTATTCCTCTTGAATTGGCCAGCCTTCATGAGAAATACTCGTCAAGTTGCAGATTGTTCGAGTACCAAGAACTTGTATCAGCAACATCAAATTTCTTGCCTGAGAACTTGATTGGGAAAGGAGGAAGTAGTGAGGTTTATAGAGGGTGCCTTCCTGATGGACAGGAACTTGCAGTGAAGATCCTAAAGCCTTCTGATGAGGTTTTAAAGGAGTTTCTTCTTGAAATAGAAATTATCACTACCTTGAATCATAAAAACATTATATCTCTTCTTGGATTCTGCTTTGAGAATGGGAATCTTCTTCTTGTCTATGATTTATTATCAAGAGGAAGCCTTGAAGAAAACCTTCATGGAAGTAAGAAAAATTCTCTTGTGTTTGGTTGGAATGAGAGATATAAGGTTGCGATGGGTGTTGCCGAGGCTTTGGATTATCTGCACTGCAAAGGTGATCAGCCTGTGATCCATCGCGATGTAAAATCATCAAATGTATTATTATCTGAGGATTTTGAACCCAAGCTCTCTGATTTTGGACTTGCTAAATGGGCATCAACTTCATCATCACAGATAACTTGCACAGATGTTGCTGGAACCTTTGGCTACCTGGCTCCTGAATACTTCATGTATGGCAAAGTACATGATAAGATCGACGTCTATGCTTTCGGTGTCGTGCTCCTTGAGCTTCTTTCAGGAAGGAAGCCCATAAGTGGTGATTTTCCAAAAGGTCAAGAGAGTCTTATCATGTGGGCAAGTCCACTTCTAGATAGTGGAAAAGTGTTGCAACTGTTAGATCCCACTTTGGGCGATAACTATGATCATGAGGAGATGGAAAGAATGGTCTTAGCAGCCACACTTTGTTTAAGGCGTGCTCCGAGAGCTAGGCCTAAAATGAGCCTTATTTCTAAGCTCCTTCATGGTGATGCTGATGTAATCAAGTGGGCAAGGTCGGAAATTAATGTGAAGAAAGCACCGGAAATGCTTGAAGATGAAGCGTGTCCACCGAGCAACCTGCAGTCACATCTTAACCTTGCACTCCTTGATGTGGAAGATGACTTGCTCTCCATGTGTAGTGTCGAGCAGCACGTCTCTTTGGAGGACTACTTGAGAGGCCGGTGGAGCCGCTCCTCGAGCTTTGACTGA 1716 0.4353 MEVFSGHRNGLLGSIHWKISKSTKVLSDESAESDAGKSTGQFSDHSLAKILMDTTEFDRKDSCSVCDPILALPPPDSCHQSAEEESCSDRGCDNSLAIVPVPTMDAAPPELKPGWPLLHQRISSETQFPDRLSARQISVVQWAMRLPSRNLSYASDQDRKPQDESVPLDSETGAVVPVDYGIVTVSLPEPNSKSIPLELASLHEKYSSSCRLFEYQELVSATSNFLPENLIGKGGSSEVYRGCLPDGQELAVKILKPSDEVLKEFLLEIEIITTLNHKNIISLLGFCFENGNLLLVYDLLSRGSLEENLHGSKKNSLVFGWNERYKVAMGVAEALDYLHCKGDQPVIHRDVKSSNVLLSEDFEPKLSDFGLAKWASTSSSQITCTDVAGTFGYLAPEYFMYGKVHDKIDVYAFGVVLLELLSGRKPISGDFPKGQESLIMWASPLLDSGKVLQLLDPTLGDNYDHEEMERMVLAATLCLRRAPRARPKMSLISKLLHGDADVIKWARSEINVKKAPEMLEDEACPPSNLQSHLNLALLDVEDDLLSMCSVEQHVSLEDYLRGRWSRSSSFD 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00546 571 PANTHER - 8 554 - -
Adu08g00546 571 Pfam Protein kinase domain 229 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00546 571 PANTHER OS08G0249100 PROTEIN 8 554 - -
Adu08g00546 571 ProSiteProfiles Protein kinase domain profile. 225 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00546 571 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Adu08g00546 571 Gene3D Transferase(Phosphotransferase) domain 1 300 514 - -
Adu08g00546 571 SUPERFAMILY Protein kinase-like (PK-like) 206 494 IPR011009 -
Adu08g00546 571 Gene3D Phosphorylase Kinase; domain 1 192 299 - -
Adu08g00546 571 SMART serkin_6 225 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00546 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00546 Adu-Chr8 9882659 9887035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00546 212 495 Trihelix Transcription Factor Family AT1G68690 45.329 3.63e-75 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Adu08g00546 Pkinase 7.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00546 - - aprc:113846853 822.772