Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00545 ATGGATCCCTACTTTCATCACTACCGTCGCCCAAATACGTACATTCCTCTTCCTCCGCAGTATAACCACCACCATCTCCGTCAGGTTCCCAACCACGTTCTTGTGAACCCTACCGCATTCAATTTCAACCCTCCCGTTTTTTTACCCGCCAATCCACTCTTTGTTCCTCAGGTTCCTGTTCTTTTCGAACATGATTCGCGTCACCGTAGTTCAATGCTGTCGCAGTCTCCTTCAAATTCTAACCCTAGCCGCAGTGCTTCCAGGTTCAGTAACGAGTGCTTTGGCGGAGCAAACCGCCGTTGCCGTGTGGTTGTTCCTCCGAATTCCGGTATCGAATCGAAACTTTGCTCGGAAGAGGCGCGAGACTCTTCTCTCGAGACTACGGCTTTGGAACTGGATAGGTACGATTACGATAGAGTAGATAAGGTTCATGAATATACTGGCATTCCAAAGAAACAGGTTAAGAGAAAGAGTGCTTTTCTTAGAATCCAGGCGCCAAAACCGAGCAATGGTGAGAATGAGGATGATGAACAATTACATTGTGATGATTGTGCTGTTGTTGACTCAAAACCTTGTTCTAGTTCTTCGAGAATTGAAGACAAGCATTGTTTGAATGATGGGAAGCAAGCAGAAGTGGGAGAAGAAATTCCTTTTGGGGTTGATGTTTTCTTTGAATCGAATTCTATGGTTGCCAAGGCTATTGTGGGGTCTTCCAGTTCTTCCTTTGTTTCTAATCCTGGAACCACTGCAGTTTCTAATACAGCTTTTTCTAATCCTGGAACCACTGCAGTTTCTAATACAGCTTTGAGTCCTATTGGAAAGACAAAGAAAAAGAAAAAGAAGGCTAAAAAAAGGAAGTGTTTGGTTTCTGAAATTTCTTGTTCTGATGCACATAGAGTTTCAGAACTACCAGCAAGTGCTGCCCAATCAAATAGTTCCCAGCACCTGGCAAACGACATCTCTATTTCTGGAAAGGACTTGACTGCACAGAAGGATGTGTCTTTGGTTTCTGAAATTTCTTGTTTGGGTACACATCAAGTAGAACTACCTGCCGACGGTTCTGTAAATTCTCATAGCTCTCAGTGTTTGGCAAATGGCACCTCGAGTTCTGGTGAGGACTTGATTGCACAGACGAATGCATCCTTGGTTTCTAAAAGTGGTTGTTCTGATTCACAGCTAGTAAAACTGTCTGAAGTGAATTCTATGGTTGCCAAGGCTATTGTGGTGCCTTCAAATTCTACCATTGCTTCTAATGCTGAAACAACTGCTGTTTTGAAGACAGATTTGAATCCTAATCAAAAAGGGAAAAAGGCTAAACGAAAGTCTAAAAAAAGAAAGCAATTGGTTTCTGAAAGTTGTTGTTATGAATCAAAGCGAATAAAACTAACTGAAGGTGCTGCCAATTCAAATAGCTCACACTGCTTGTCATATAACACCTCTTGTTCTGGGAAGGACTTGACTTCACAGAAGAGCGTAGCTTTGGGTTTACAGCAAGCAGAACAATTTGCTGGTTCTGGAAATTCACATAGCTCCCAATGCTTGGCGAATGGCACCTCTAATTCTAGTAAGGACTTGATCACAGAGGTGAATGTATCTTTGTTTTCCAAAGATTCTTGCTCAGAATCACAGCTTGTAAAACTATCTGAGTTTGCTGTGATTTCAAATAGTTCACAGTGCTTGGTAAATGGCACCTCTAATTCTGGGAAGGATTTAAGGCCAAAGAAGAATGTATCTGATTGCTTTTCTCATCTTCATCCGAGTCCAGTCCAAAATCCTAATGGAAAAACTAAGGTGGCACAATCCTCTAAGGGGATTGTAACAGAAGAAGTTGCCAATACAATTTCCGGTAAAGCAACTCCAAGGGTTGTTAAGAAGAAAAAGATTGTTAAAAGAGTGGTCAAAAAGGTTGTGAAACCAAAATCAAGTAGGTCAAGTTCAATATCAGCAAATATGTTTGATGGGATAGTGAAAGAAGATAATGTTCCTGTTAGTTCATTAACTGCTGCTGCTCCTTTGGACAAGATCCCAACGACTTCTTTTGAGGAAAAGACTGCCCCTGTTGACAAGATGTCAGTTCCAGATTATTTCCAGTCTTTACCAAGTGAAGGAAATTTGTTGCTTGAAGACAAAAATGCTGTTGTACACCTTGAAGAAAAGCATACTGAATTATTCAATGGAAATACTTCTGACATTAATCACATTGAGGCTTATAGTAAGCAATCATGCCAACATGAAAAGGAGATTTGTGACATACAATCAGTTCCAAATTCTGATATTTCCATTGATTGTGTTAAAGGGGACACAGGTACTGTTGAAGAGAGAGAGGTTAGAACTCTCTTAAAATTTTCTCCTTCAAAGATGGAGGGCATGTCTCTAGATGCAGAAAATCCAGTTGGTCTTGCAAATGTTGTCGACACAACCTCAGATCTGTTGAAGGGTCCTAGTCTTTCAGAAGCCTTAGATATATCTGTTCCAATGTTAGATTTTGGCTCACAATCCAGAACAGATGGGATCACAACTTTAACTGTGAAAAGGGGGATTTCTGTGGCTGATTTATATGAGGATGCAAACAAGATTTCACCCTTGTACAAAAGGCGCAGAACCACAGCTTGTCACTCTAGTATCACTGAGTGTCCATCTGAACTCAGTGATGTGATTGTGGCTTCCACCACATCTTGTGCAGAAGTCCCTATTCACTTTAGTGATATGCAAATACATAAGGAAGAAGTTGAATTGCTAAGCATGGCTGTTATGTCTACTCCGTTGCTGACTTGCAGCACTCAGGCATTGCCTCTAATTCTCTTCTTGAATACTCAGCCACTCCAAATGTTCATTTTCCAATGTTGGAAGGACGTTGGGGAAAATCATCAGAAGAGAGTTTGTGTGCAAAGATCTCCAGATTGTGTCATTCCTAAAACTTCAAAGGACCAGTCCTCCTTTTTTCCCCGATCAAAGCCATTTACTTCTTCATCCCGTTCATTAAAACCTCGAACCTGGCTTCGAACAGGGAACACTCAAAATACTCTTTATACCCGTAAGGGTAACAGTCTTGTTCGGAAAGTTATCCCTGTTTCTGCTTCAACATCAACATCCGTTGCTAACCAGTCACCATCTTTGGGCTTTGACAACTTTGGAAAGAGCATCAGATCTGAATGCATGGTTAATGTTCCAGGTCAACCAGCTGATCCTAAGAATGTTGGAGAAACTAATGATGCCGCAAAATCTTATGAGGAATTGTGCAAATATTCTGAAACATACGAAAATCAAATTGGTTCAGACAATCGTGGGGCTGGCCAAGTTGAGATTTCTTCTTCAATTGCAAAGAGAATAGTATATATGAAGCCCAAGTCAAATAAATTAGTTGCATCTTTGGATTCTAGTAATCTCTCTGTCTCTACTGATGGCAAGACTCAAACAGCATACTCCAATGGCTACTACAAGAAGAGCAAAAATCAGATAATAAGGACTTCATTTGTTAGTCATATCAGCCCAACAGTTACAATGCAAGATAGTAATGTAAATTCTGATGGTCCATCGGATTCTAAAGAGATTTGCAGCAGGTTTACAAAGAAGTGGTCGCAAAAAGTTGCTGGGACCTTGTGCAAACCTTTAAAAGCCCCACTTGTTGGGACCCTTTCATCAAAAAACAACACTGGCTCAGGGCATTATCGGAAGATTTTGCCTCACTTTTTTCAATGGAAAAGATCAACATTTCGAAGAAGATTTGTTCACAATCGTGATTTAAGCTCCAATTCTACTCCCTCATCAGCAAACAGCAAGAAATTGCTTCTTTTAAGGAAGAGGGATGCTGTTTACACTAGATCAACCCATGGGTTTTCTCATTGGAAACCTAAGGTATTACATGCTGGTGGATCCATAAAAGGGTCCAAATTTGCTGGCAGGCACTCTGAGAAGGTTAATGAGGAAGCACTTGCTGTTGCTGTGTTGGAGAGGAAAACAAGAGAACAGAAAGATGTTGCTTGTAACAGTTCTCAGGCAAAAGGCTTGGCTGCCAAAGAAGGTTCCATCCAACGAAGATTAGTGATTGGGGAAAATGTGTATTTCCAAATTGGCAAAGGTAATCAGCTTATTAGGGACCCAAAGAATCGGACTCGGATTTTGGCTAATGAAAAAGTTAGATGGAGTCTGCACACTGCTAGACAGCGCCTTGCACGAAAGCAGAAGTACTGTCAGTTTTTTACCAGATTTGGGAAATGTAACAAGGATGATGGGAAGTGTCCTTATATTCATGATCCCTCAAAAGTTGTTGTCTGCACTAAGTTTCTAAATGGTTTATGTTCTAATGGCAACTGCAAATTGACTCATAAGGTTATTCCGGAGAGAATGCCAGATTGTTCTTATTTTTTGCAAGGTTTATGCACAAACAGAAGTTGTCCTTACAGACATGTCAATGTGAATCCTAAGGCTTCTATTTGTGGAGAATTTCTCAGGGGCTATTGTGCCGATGGAAATGAGTGTCGGAAGAAGCATAGCTATGTCTGTCCAACCTTCGAAGCAATGGGAAACTGCGAAGAAGGAACCAAATGCAAGCTTCATCACCCGAAGAAACTGAGTAAGGAAAAGAAAAGGAAGAGGTCCAGAGATGAGAATGTTGGTAGACGGCGTTACTTTGGTTCCGTTCTCACTGATATCAAAGAAACTGGGTTAATGGTGGCTCAAAGGCAATGGCAACAGAGTCATGACAAAGACGGAGATGTTGCTGACTATATCGGCTTCGAAGTTGAAGAAAGTGTTGATCAACCATATGAACAGGCAACACCATGTAACAATGATATTTGGGACTTGCAATTGGACAATCTTGATGAACCTATTAGACCTGTTCTTACGTTGAAAAACATTTTTATGGCTCAATCATCTTCAGTCTAG 4887 0.409 MDPYFHHYRRPNTYIPLPPQYNHHHLRQVPNHVLVNPTAFNFNPPVFLPANPLFVPQVPVLFEHDSRHRSSMLSQSPSNSNPSRSASRFSNECFGGANRRCRVVVPPNSGIESKLCSEEARDSSLETTALELDRYDYDRVDKVHEYTGIPKKQVKRKSAFLRIQAPKPSNGENEDDEQLHCDDCAVVDSKPCSSSSRIEDKHCLNDGKQAEVGEEIPFGVDVFFESNSMVAKAIVGSSSSSFVSNPGTTAVSNTAFSNPGTTAVSNTALSPIGKTKKKKKKAKKRKCLVSEISCSDAHRVSELPASAAQSNSSQHLANDISISGKDLTAQKDVSLVSEISCLGTHQVELPADGSVNSHSSQCLANGTSSSGEDLIAQTNASLVSKSGCSDSQLVKLSEVNSMVAKAIVVPSNSTIASNAETTAVLKTDLNPNQKGKKAKRKSKKRKQLVSESCCYESKRIKLTEGAANSNSSHCLSYNTSCSGKDLTSQKSVALGLQQAEQFAGSGNSHSSQCLANGTSNSSKDLITEVNVSLFSKDSCSESQLVKLSEFAVISNSSQCLVNGTSNSGKDLRPKKNVSDCFSHLHPSPVQNPNGKTKVAQSSKGIVTEEVANTISGKATPRVVKKKKIVKRVVKKVVKPKSSRSSSISANMFDGIVKEDNVPVSSLTAAAPLDKIPTTSFEEKTAPVDKMSVPDYFQSLPSEGNLLLEDKNAVVHLEEKHTELFNGNTSDINHIEAYSKQSCQHEKEICDIQSVPNSDISIDCVKGDTGTVEEREVRTLLKFSPSKMEGMSLDAENPVGLANVVDTTSDLLKGPSLSEALDISVPMLDFGSQSRTDGITTLTVKRGISVADLYEDANKISPLYKRRRTTACHSSITECPSELSDVIVASTTSCAEVPIHFSDMQIHKEEVELLSMAVMSTPLLTCSTQALPLILFLNTQPLQMFIFQCWKDVGENHQKRVCVQRSPDCVIPKTSKDQSSFFPRSKPFTSSSRSLKPRTWLRTGNTQNTLYTRKGNSLVRKVIPVSASTSTSVANQSPSLGFDNFGKSIRSECMVNVPGQPADPKNVGETNDAAKSYEELCKYSETYENQIGSDNRGAGQVEISSSIAKRIVYMKPKSNKLVASLDSSNLSVSTDGKTQTAYSNGYYKKSKNQIIRTSFVSHISPTVTMQDSNVNSDGPSDSKEICSRFTKKWSQKVAGTLCKPLKAPLVGTLSSKNNTGSGHYRKILPHFFQWKRSTFRRRFVHNRDLSSNSTPSSANSKKLLLLRKRDAVYTRSTHGFSHWKPKVLHAGGSIKGSKFAGRHSEKVNEEALAVAVLERKTREQKDVACNSSQAKGLAAKEGSIQRRLVIGENVYFQIGKGNQLIRDPKNRTRILANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDDGKCPYIHDPSKVVVCTKFLNGLCSNGNCKLTHKVIPERMPDCSYFLQGLCTNRSCPYRHVNVNPKASICGEFLRGYCADGNECRKKHSYVCPTFEAMGNCEEGTKCKLHHPKKLSKEKKRKRSRDENVGRRRYFGSVLTDIKETGLMVAQRQWQQSHDKDGDVADYIGFEVEESVDQPYEQATPCNNDIWDLQLDNLDEPIRPVLTLKNIFMAQSSSV 1628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00545 1628 MobiDBLite consensus disorder prediction 71 89 - -
Adu08g00545 1628 ProSiteProfiles Zinc finger C3H1-type profile. 1391 1420 IPR000571 GO:0046872
Adu08g00545 1628 MobiDBLite consensus disorder prediction 69 89 - -
Adu08g00545 1628 Gene3D - 1474 1536 - -
Adu08g00545 1628 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3 221 1617 - -
Adu08g00545 1628 PANTHER CCCH ZINGC FINGER 221 1617 - -
Adu08g00545 1628 ProSiteProfiles Zinc finger C3H1-type profile. 1446 1472 IPR000571 GO:0046872
Adu08g00545 1628 Gene3D - 1418 1473 - -
Adu08g00545 1628 SMART c3hfinal6 1473 1499 IPR000571 GO:0046872
Adu08g00545 1628 SMART c3hfinal6 1500 1522 IPR000571 GO:0046872
Adu08g00545 1628 SMART c3hfinal6 1446 1471 IPR000571 GO:0046872
Adu08g00545 1628 SMART c3hfinal6 1391 1419 IPR000571 GO:0046872
Adu08g00545 1628 SMART c3hfinal6 1420 1444 IPR000571 GO:0046872
Adu08g00545 1628 ProSiteProfiles Zinc finger C3H1-type profile. 1473 1500 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Adu08g00545 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00545 - - ahf:114924304 1719.13