Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00528 ATGGGTTCACAGCTACATCTTCTGCTGCATCCTGTTCTTGTTCTTGTTTGGATTCTTTGTGGTGCAGCAGATGCAGTAACTCAACCAAACTCAAATTGCACAAAGCGCTGTGGCTCCCTCGAAATTCCGTTCCCATTTGGCACCGACGAGAGCTGTTCCCTCGACAGCTCCTTCCTCATCTCTTGCAACCACACTTCAACCCCATACCTGACTCACAACAACTCAACCGTGCTGAGCATCTCGCCCGACGGCGAAATGCGCGTCTCAGCAGCAGTAGCTAGAGGCTGCTACGAAGTCAACGGCACGCGAATCAACGAAACCAGTTACGATAAGATCTTCAACTTGACACACTTCAGCTTCTCATCGAGTAAAAACAAGCTCACAGTGGTTGGTTGCAACACAATTGGAGAAGTAGTAGGGTATAATGTTATAGAGAGAAGAAACTATGCCACTGGGTGCTTTTCAGTGTGCCTCAGTGTTAATGAAACAACTAGCGGGATCTGCACCGGCGCCGGTTGTTGCCAGAGCCCAATACCGGCGAGTGGCCTATCGGATATCGGTATTGGATCTTATAGTAGTGGTGCTGACAGCTACAACGCCGTTTTTGGCAACATCAACCCCTGCGGCTACGCGTTTGTGGCGGAGGATGGAGTCTACAATTTCTCCTCCGCAGACCTTGTCAACTTCCGCCACCAAAGTTTTCCCGTTGTAGTGGATTGGGCTGTGGGGAATCAGACTTGTGAAGAAGCTCAAAAGAACACTTCAAGCTATGCATGTAGGGCTGATAAAAGTGAATGTTACAATTCAACCAAGGGACTTGGTTATGTTTGCAAATGCTCCACTGGTTTTGGGGGAAATCCTTATCTCGTTGGTGGTTGCCAAGACGTTGATGAATGCATGAACAAGGAATGGAACGATTGCTATAGTAGAGCAATATGCAAGAACGTAGCTGGTAACTATACCTGTTCGTGTCCAAAAGGATACCATGGAGATGGGAGAGAAAATGGAACAAAGTGCCGTCGTCAGTCCAGGACACAATTCATTTTAATCATTGCATTGGGCGTTAGTGTTGGTGTTATAGCACTACTTGTGACAAGCTTCTATGTGTATTGGAGAATGAAGGAAAAGAGGTTAAATAAACTTAAGGAACAGTTCTTTCAACAAAATGGTGGCTTCATCCTACTACAAAAGATTTCAAGACATAGAGGGTCAAAAGAAACAGCTAAACTCTTCACCGTGGAAGAATTAAAGACAGCCACCAACAACTTTGACGAAAGCAAGATCTTAGGCAAAGGGGGTCAAGGAACAGTTTATAAAGGATTACTATCAGACAATAGAACCGTAGCAATTAAAAGATCCAAAATCAGTGGCTCAACCCAAATTGAACAATTCATCAATGAAGTTGTGTTGCTTTCCCAAATCAACCATAGAAACGTGGGGACACTAGGGTATCTTGACCCTGAATACATGCACACTAGCCAGTTAACTGAGAAAAGTGATGTGTATAGTTTTGGAGTCGTCTTAGCAGAGCTGCTCACGGGAAAGAAGGCGCTCTCTTTCGCCGTGTCGCCGGAGGTTAGAAACCTTGCCGTATACTTTGTTTCTTCAATGGAAGAAGGATGTTTAGTTCAGATTGTGGATGAACACATTATAAATGAGGCAAACTTGAGGATCTTGTGGAATTTGCCAATGTTGCTAAACAGTGTTTGA 1710 0.448 MGSQLHLLLHPVLVLVWILCGAADAVTQPNSNCTKRCGSLEIPFPFGTDESCSLDSSFLISCNHTSTPYLTHNNSTVLSISPDGEMRVSAAVARGCYEVNGTRINETSYDKIFNLTHFSFSSSKNKLTVVGCNTIGEVVGYNVIERRNYATGCFSVCLSVNETTSGICTGAGCCQSPIPASGLSDIGIGSYSSGADSYNAVFGNINPCGYAFVAEDGVYNFSSADLVNFRHQSFPVVVDWAVGNQTCEEAQKNTSSYACRADKSECYNSTKGLGYVCKCSTGFGGNPYLVGGCQDVDECMNKEWNDCYSRAICKNVAGNYTCSCPKGYHGDGRENGTKCRRQSRTQFILIIALGVSVGVIALLVTSFYVYWRMKEKRLNKLKEQFFQQNGGFILLQKISRHRGSKETAKLFTVEELKTATNNFDESKILGKGGQGTVYKGLLSDNRTVAIKRSKISGSTQIEQFINEVVLLSQINHRNVGTLGYLDPEYMHTSQLTEKSDVYSFGVVLAELLTGKKALSFAVSPEVRNLAVYFVSSMEEGCLVQIVDEHIINEANLRILWNLPMLLNSV 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00528 569 SUPERFAMILY EGF/Laminin 294 333 - -
Adu08g00528 569 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 479 IPR045274 GO:0007166
Adu08g00528 569 Gene3D Phosphorylase Kinase; domain 1 397 481 - -
Adu08g00528 569 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 20 479 - -
Adu08g00528 569 ProSiteProfiles Protein kinase domain profile. 423 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00528 569 ProSitePatterns Calcium-binding EGF-like domain signature. 295 322 IPR018097 GO:0005509
Adu08g00528 569 SMART egfca_6 295 340 IPR001881 GO:0005509
Adu08g00528 569 ProSiteProfiles EGF-like domain profile. 295 334 IPR000742 -
Adu08g00528 569 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 313 324 IPR000152 -
Adu08g00528 569 Pfam Calcium-binding EGF domain 295 339 IPR001881 GO:0005509
Adu08g00528 569 SUPERFAMILY Protein kinase-like (PK-like) 407 518 IPR011009 -
Adu08g00528 569 SMART egf_5 298 340 IPR000742 -
Adu08g00528 569 SMART egf_5 246 294 IPR000742 -
Adu08g00528 569 Gene3D Transferase(Phosphotransferase) domain 1 482 540 - -
Adu08g00528 569 CDD EGF_CA 295 331 - -
Adu08g00528 569 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 480 559 - -
Adu08g00528 569 Gene3D Plasmodium vivax P25 domain 228 347 - -
Adu08g00528 569 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 480 559 IPR045274 GO:0007166
Adu08g00528 569 SMART serkin_6 423 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00528 569 Pfam Protein tyrosine and serine/threonine kinase 484 518 IPR001245 GO:0004672|GO:0006468
Adu08g00528 569 Pfam Wall-associated receptor kinase galacturonan-binding 33 88 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00528 Adu-Chr8 9626024 9630448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00528 480 557 Receptor kinase-like Gene Family AT1G21250 53.846 6.08e-18 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Adu08g00528 PK_Tyr_Ser-Thr 5.8e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00528 - - aip:107607783 823.928