Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00515 ATGGCTGAGCATTTATCAAAGAACCTCCTCTTCCTCATTTTCTTTATAGCAGCTCATGCTAATGATGCAGCAACTCAACCCGCCAAACACTGCCTAACCAAATGCGGCCACGTCAGCATTCCCTTCCCGTTTGGCACCACAACGGATTGCTCCCTTGACACCAATTTTCTCATAAATTGCACCAACAATGTCCCATACTTATTGCCCTTATCAAACGACACCGCCCTAATTCTCCTAAGCATATCCCTCGTCGATTCCGATCTCCGCGTTTCGTCGCCGGTAGCTAGCGATTGCTATAGCATCGACGACCAGGGCAAAATCAGCAACATTCAAACCGATCAGTTTCTTTTCTCCGGAAACTTTAGCATCTCGTGGACCCGAAACACCTTCACCGCAATTGGTTGTAACACACTTGGAGTAGTTGTGGCGTTTACACTGGAAGATCCGAGACGTTATCCCGCAACATGCTTTTCCTACTGCGAGAAACTTGAACATGCGAGTAATGGCTCCTGCACCGGCAGCGGTTGTTGCCATACTAGTATTCCCCGCGCCGCAGAAGGGCGGTTATTAACGTTGATCGGTTATTATTTTGAGAACAATGACTTTAACAACAGCCAAGTGAGGGACTTCAACCCATGCAGTTATGCGTTCTTGGTGGAAGAAGGTGGCTATGAATTTCAGACGACACACCTGAAGAAGCTGGAGAGTACTGAGTTTCCGGTGGTTCTGGATTGGAGTATAGGGGACCAAACGTGTATTGAAGCTATGAAGAATCCTTCCAGCTTTGCGTGTAAGGCAGAGAACAGCACGTGTCACGATTCTGATAAGCGTCCTGGTTATGTTTGCAAATGCCCCTCTGGTTTTCAGGGTAACCCTTATCTCCTTCATGGTTGTCAACAAGATATTGATGAATGCGCTGGACCCAATGATTGCTTCCATGAAGCAAAATGCGAGAACACACCTGGCAGCTACAACTGTTTGTGTCCGGAAGGATTTGAAGGAGACGGGAAAAACAATGGAACTCGATGTAATAGTCCCAAGTCCAGTTATAGGACAAACAACACTTTGATTTATTCATTATGTTTGGGCATCAGCATAGGCATCTTAGCGTTAGTTGTGGCAAGCTTTTATGTGCATTGGAAAGTGAACAAAAGAAAGCTCATCAAACTTAAAGAACAGTATTTTCAACAAAATGGCGGTTTCTTGTTGCAAGAACATATATCCAAACATAGAAACTCAAGCCAAATAGCCAAAGTCTTCACTATTGAGGAACTACGAAAAGCAACCAACAACTTTGATGCATGCAAAATCCTAGGCCAAGGGGGCCAAGGAACAGTTTACAAAGGAGTATTATCAGACAATAAAACCGTAGCAATAAAGAAGTCCAAAATTAGTAGCCCAAGCCAAATTAATAAGGACTTCATCAATGAGTTAGTTGTACTCTCACAAATCAACCATAGGAATGTTGTTAAGCTCTTGGGTTGTTGTTTAGAAACAGAAATTCCCTTGCTTGTTTACGAATTCATTCCCAATGGTACTGTTTTTGAGCATCTTCATGGTCATGGAACATTTCTAAGACTTACATGGAAAACAAGATTGAGAATAGCTGCTGAAACTGCTGGGGCTTTAGCTTACTTGCATTTGGATACTTGTATCCCCATAATTCATAGAGATGTGAAAACTAGCAATATTCTACTTGATCATGATCTCACTGCAAAGGTTTCTGATTTCGGAGCTTCAAGGATTGTTCCTCAAGATAAAATTGAGTTAGCTACTTTGGTGCAAGGAACATGTGGGTATCTTGATCCAGAAACCTTCCTCACAAGCCAATTAACGGATAAGAGTGATGTTTATAGTTTCGGAGTTGTTCTTGCGGAATTATTTACAGGAAGAAAAGCTCTCTCTTTCGACATGCCGGATGCTGAGAAAAACCTTGCAATGTTCTTTGTAACTTCGATGGAAGAGAATCGTTTGCTTGATATTGTAGACAAGAGCATAATAAATGAAGCAAAGGTTGAGCATGTATATGAATTTGCCAAGATTGCAAAACAATGTTTAAGCTCGAAAGGAGAAGAAAGGCCTACAATGAAAGTAGTGGCAATGGAACTTGAAGGGCTTAGAGCTGAGGAAAAACATATATGGTGCCGGGAGAAGGAGGAATTTCCATCTGAAGAAACTGAAATCCTTCTCAAAGCATCACCTTCTATTAGCAATAATCTTGAAGAAGAATACTTTATGCTTTTGGACCGAATTTAG 2256 0.4202 MAEHLSKNLLFLIFFIAAHANDAATQPAKHCLTKCGHVSIPFPFGTTTDCSLDTNFLINCTNNVPYLLPLSNDTALILLSISLVDSDLRVSSPVASDCYSIDDQGKISNIQTDQFLFSGNFSISWTRNTFTAIGCNTLGVVVAFTLEDPRRYPATCFSYCEKLEHASNGSCTGSGCCHTSIPRAAEGRLLTLIGYYFENNDFNNSQVRDFNPCSYAFLVEEGGYEFQTTHLKKLESTEFPVVLDWSIGDQTCIEAMKNPSSFACKAENSTCHDSDKRPGYVCKCPSGFQGNPYLLHGCQQDIDECAGPNDCFHEAKCENTPGSYNCLCPEGFEGDGKNNGTRCNSPKSSYRTNNTLIYSLCLGISIGILALVVASFYVHWKVNKRKLIKLKEQYFQQNGGFLLQEHISKHRNSSQIAKVFTIEELRKATNNFDACKILGQGGQGTVYKGVLSDNKTVAIKKSKISSPSQINKDFINELVVLSQINHRNVVKLLGCCLETEIPLLVYEFIPNGTVFEHLHGHGTFLRLTWKTRLRIAAETAGALAYLHLDTCIPIIHRDVKTSNILLDHDLTAKVSDFGASRIVPQDKIELATLVQGTCGYLDPETFLTSQLTDKSDVYSFGVVLAELFTGRKALSFDMPDAEKNLAMFFVTSMEENRLLDIVDKSIINEAKVEHVYEFAKIAKQCLSSKGEERPTMKVVAMELEGLRAEEKHIWCREKEEFPSEETEILLKASPSISNNLEEEYFMLLDRI 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00515 751 SMART serkin_6 432 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00515 751 SUPERFAMILY EGF/Laminin 300 338 - -
Adu08g00515 751 ProSiteProfiles EGF-like domain profile. 301 344 IPR000742 -
Adu08g00515 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 554 566 IPR008271 GO:0004672|GO:0006468
Adu08g00515 751 Gene3D Laminin 305 345 - -
Adu08g00515 751 Gene3D Phosphorylase Kinase; domain 1 403 508 - -
Adu08g00515 751 SUPERFAMILY Protein kinase-like (PK-like) 415 704 IPR011009 -
Adu08g00515 751 ProSiteProfiles Protein kinase domain profile. 432 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00515 751 Pfam Wall-associated receptor kinase galacturonan-binding 31 91 IPR025287 GO:0030247
Adu08g00515 751 Gene3D Laminin 250 304 - -
Adu08g00515 751 Pfam Calcium-binding EGF domain 301 343 IPR001881 GO:0005509
Adu08g00515 751 SMART egfca_6 252 299 IPR001881 GO:0005509
Adu08g00515 751 SMART egfca_6 301 344 IPR001881 GO:0005509
Adu08g00515 751 Pfam Wall-associated kinase 169 284 IPR013695 GO:0004674|GO:0016021
Adu08g00515 751 ProSitePatterns Calcium-binding EGF-like domain signature. 301 326 IPR018097 GO:0005509
Adu08g00515 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 17 740 - -
Adu08g00515 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 740 IPR045274 GO:0007166
Adu08g00515 751 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 317 328 IPR000152 -
Adu08g00515 751 Gene3D Transferase(Phosphotransferase) domain 1 509 727 - -
Adu08g00515 751 SMART egf_5 304 344 IPR000742 -
Adu08g00515 751 SMART egf_5 251 299 IPR000742 -
Adu08g00515 751 Pfam Protein tyrosine and serine/threonine kinase 435 702 IPR001245 GO:0004672|GO:0006468
Adu08g00515 751 CDD STKc_IRAK 438 706 - -
Adu08g00515 751 CDD EGF_CA 301 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00515 Adu-Chr8 9248878 9251779 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00515 9 729 Receptor kinase-like Gene Family AT1G21230 45.753 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Adu08g00515 PK_Tyr_Ser-Thr 3.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00515 - - ahf:112765693 1182.55