Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00513 ATGGCTGAGCATTTATCAAAGAACCTCCTCTTCCTCATTTTCTTTATAGCAGCTCATGCTAATGATGCAGCAACTCAACCCGCCAAACACTGCCTAACCAAATGCGGCCACGTCAGCATTCCCTTCCCGTTTGGCACCACAACGGATTGCTCCCTTGACACCAATTTTCTCATAAATTGCACCAACAATGTCCCATACTTATTGCCCTTATCAAACGACACCGCCCTAATTCTCCTAAGCATATCCCTCGTCGATTCCGATCTCCGCGTTTCGTCGCCGGTAGCTAGCGATTGCTATAGCATCGACGACCAGGGCAAAATCAGCAACATTCAAACCGATCAGTTTCTTTTCTCCGGAAACTTTAGCATCTCGTGGACCCGAAACACCTTCACCGCAATTGGTTGTAACACACTTGGAGTAGTTGTGGCGTTTACACTGGAAGATCCGAGACGTTATCCCGCAACATGCTTTTCCTACTGCGAGAAACTTGAACATGCGAGTAATGGCTCCTGCACCGGCAGCGGTTGTTGCCATACTAGTATTCCCCGCGCCGCAGAAGGGCGGTTATTAACGTTGATCGGTTATTATTTTGAGAACAATGACTTTAACAACAGCCAAGTGAGGGACTTCAACCCATGCAGTTATGCGTTCTTGGTGGAAGAAGGTGGCTATGAATTTCAGACGACACACCTGAAGAAGCTGGAGAGTACTGAGTTTCCGGTGGTTCTGGATTGGAGTATAGGGGACCAAACGTGTATTGAAGCTATGAAGAATCCTTCCAGCTTTGCGTGTAAGGCAGAGAGCAGCACGTCTCACGATTCTGATAAACGTTCTGGTTATCTTTGCAGATGCCCCTCTGGATTTGAGGGCATCACCATAGGCATCTTAGCATTAGTTGTGGCAAGCTTTTATGTGCATTGGACAGTGGACAAAACAAAGGTCATCAAACTTCAAGAACATAATTTTCAACAAAATGTGGGTTCATTGTTGCAAGAACATATAGCCAAACATAGCTGCTCAAGCCAAATAGACAAAGTCTTCACTATTGAGGAACTAAGGAGTGCAACCAACAACTTTGATGCAGGCAAAATCCTTGGCCCCCTACATAACTGCTCAAGCCAAATAACCAAAGTCTTCACTCTTGAGGAACTAAGGAAGGCAACCAACAACTTTGATGCAGGCAAAATCCTTGGCCAAGGGAACCAAGGAACAGTTTACAAAGGAGTATTATCAGATAATATAACTGTAGCAATAAAAAAGTCCAACACTAATGACACAAGCCTAATTGAATTAATTAATAAGGACTTCATCAATGAGTTAGTTGTACTCTCACAAATCAACCACAGGCATGTGGTTAAGCTCTTGGGTTGTTGTTTAGAAACAGAAAATCCCTTGCTTGTTTACGAATTCATTCCCAATGGTACTGTTTATGAGCATCTTCATGGTCATGAACCATTTTTAAGACTTACATGGAAAACAAGATTGAGAATAGCTGCTGAAACTGCTGGGGCTTTAGCTCACTTGCATTTGGATACTTGTATCCCCGTAATCCACAAAGATGTGAAAACTAGCAATACCCTCTATGAAAAGCTATTAAAAAATTTCAAAGGCAAAGGGCCAAGGTGA 1626 0.4342 MAEHLSKNLLFLIFFIAAHANDAATQPAKHCLTKCGHVSIPFPFGTTTDCSLDTNFLINCTNNVPYLLPLSNDTALILLSISLVDSDLRVSSPVASDCYSIDDQGKISNIQTDQFLFSGNFSISWTRNTFTAIGCNTLGVVVAFTLEDPRRYPATCFSYCEKLEHASNGSCTGSGCCHTSIPRAAEGRLLTLIGYYFENNDFNNSQVRDFNPCSYAFLVEEGGYEFQTTHLKKLESTEFPVVLDWSIGDQTCIEAMKNPSSFACKAESSTSHDSDKRSGYLCRCPSGFEGITIGILALVVASFYVHWTVDKTKVIKLQEHNFQQNVGSLLQEHIAKHSCSSQIDKVFTIEELRSATNNFDAGKILGPLHNCSSQITKVFTLEELRKATNNFDAGKILGQGNQGTVYKGVLSDNITVAIKKSNTNDTSLIELINKDFINELVVLSQINHRHVVKLLGCCLETENPLLVYEFIPNGTVYEHLHGHEPFLRLTWKTRLRIAAETAGALAHLHLDTCIPVIHKDVKTSNTLYEKLLKNFKGKGPR 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00513 541 Pfam Wall-associated receptor kinase galacturonan-binding 31 91 IPR025287 GO:0030247
Adu08g00513 541 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 290 IPR045274 GO:0007166
Adu08g00513 541 Gene3D Phosphorylase Kinase; domain 1 368 470 - -
Adu08g00513 541 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 17 290 - -
Adu08g00513 541 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 290 366 - -
Adu08g00513 541 ProSiteProfiles Protein kinase domain profile. 391 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00513 541 Pfam Wall-associated kinase 169 284 IPR013695 GO:0004674|GO:0016021
Adu08g00513 541 SMART serkin_6 391 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00513 541 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 376 529 - -
Adu08g00513 541 SUPERFAMILY Protein kinase-like (PK-like) 372 528 IPR011009 -
Adu08g00513 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672|GO:0006468
Adu08g00513 541 Pfam Protein tyrosine and serine/threonine kinase 393 530 IPR001245 GO:0004672|GO:0006468
Adu08g00513 541 Gene3D Transferase(Phosphotransferase) domain 1 471 536 - -
Adu08g00513 541 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 290 366 IPR045274 GO:0007166
Adu08g00513 541 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 376 529 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00513 Adu-Chr8 9241484 9244422 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00513 9 532 Receptor kinase-like Gene Family AT1G21230 35.354 1.17e-91 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Adu08g00513 PK_Tyr_Ser-Thr 6.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00513 - - ahf:112765693 673.7