Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00509 ATGGAGGATTCTTCTAATAATAACAATACTTGTGAGGACACTAAGATTTGTCCCCGCGGTCACTGGCGACCCGCCGAGGATGAAAAGCTTCGCCAACTTGTTGAACAATATGGTGCTCAGAATTGGAATTCCATTGCTGAAAAACTTCAAGGAAGATCAGGGAACAAGAATCACTGGCACGTGATCATGGCAAGAAAGCAAAGAGAGCAATCCAAGATTTGTGGCAAAAGAACCTTCCAAGACATGATGATTTTCAATAATAACAACAACGATTCCAATTCTTCTTCTTCTTCCAGTAACATCATCAAGAGACCAGCAAGAGTAATCGGGTTAGAATATTCCAGATTCTTCGATTTTCGCAACCTCGATAGCAATAAAGCTTCTACTTCTTGGAATTTCGCATCTTCTGTTCCGCCAGTAACTGATTCTTTTAGAAAAGGAGGAGGAGGAGGAAAAGACTATTTCACCATCAACGGTTCCAGTATTTATCTTCCAGAAGGTTCTAGAACCTCCGATAGATTCTATTGCAGAGTTTTCCCGGGTCCTTCTACTACTACTACTGCTACTACTGCACCATTTGGTTCCTCTAATGGATTCTCATCATCGCTCCAAAACTACAAGAGGATCGTTCCGAATCCCTTCGCCTTCAAGGGTAGTTCTACGGAGAAGGAGAAAGAAGAAGATCATGAACCTAAAAATGAAGTTCCTTTCATTGATTTTTTGGGCGTCGGTGTCTCTTCTTCCTAG 747 0.4177 MEDSSNNNNTCEDTKICPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGNKNHWHVIMARKQREQSKICGKRTFQDMMIFNNNNNDSNSSSSSSNIIKRPARVIGLEYSRFFDFRNLDSNKASTSWNFASSVPPVTDSFRKGGGGGKDYFTINGSSIYLPEGSRTSDRFYCRVFPGPSTTTTATTAPFGSSNGFSSSLQNYKRIVPNPFAFKGSSTEKEKEEDHEPKNEVPFIDFLGVGVSSS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00509 248 SMART sant 18 65 IPR001005 -
Adu08g00509 248 CDD SANT 22 60 IPR001005 -
Adu08g00509 248 Gene3D - 19 66 - -
Adu08g00509 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 67 IPR017930 -
Adu08g00509 248 ProSiteProfiles Myb-like domain profile. 19 56 IPR001005 -
Adu08g00509 248 PANTHER TRANSCRIPTION FACTOR MYB56 6 55 - -
Adu08g00509 248 PANTHER TRANSCRIPTION FACTOR MYB56 56 246 - -
Adu08g00509 248 Pfam Myb-like DNA-binding domain 19 59 IPR001005 -
Adu08g00509 248 SUPERFAMILY Homeodomain-like 18 67 IPR009057 -
Adu08g00509 248 PANTHER MYB PROTEIN-RELATED 6 55 - -
Adu08g00509 248 PANTHER MYB PROTEIN-RELATED 56 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00509 Adu-Chr8 9139999 9140875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00509 16 73 MYB Transcription Factor Family AT1G17950 39.640 1.41e-18 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu08g00509 Myb_DNA-binding 2.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00509 K09422 - nnu:104599571 144.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00509 08 9139999 9140875 Adu08g00509 08 9139999 9140875 ECH