Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00481 ATGTCAAGAAATGCATCATCAACAACTCTTCTTATCCTTTTTCTTCTTAACATCTCTTTGCTTCTTCCACCACAAATCTCTTCTCTGAACCAAGAAGGACTCTCACTACTTTCATGGATTTCAACCTTCAATTCCTCTAACTCTGCTACTGCTTCTTCCTTCTTCTCTTCATGGGATCCAACTCATGAGAATCCATGCAGATGGGACTACATAAAGTGTTCCAAACAAGGCTTTGTCTCAGAGATCATAGTACAATCCATTGATCTTCATAGCACCTTTCCAACACAGCTTGTTTCCTTCAACCACCTTGAAACTCTTGTAATCTCCAATGGAAACCTCACAGGTGAGATTCCAACTTCATTGGGAAACTTAACATCTCTTGTTACCTTGGACCTTAGCTTCAACACTCTATCAGGAACCATTCCAGATGAAATAGGACAGCTTTACAACCTTCAATGGCTATCCTTGAATTCAAACGCCTTAAATGGTGAAATTCCAACAACAATTGGAAACCTTACAAAGCTTCAGCAGCTAGCACTCTATGACAACCAGCTCTCTGGAATGATCCCCGGCGAAATAGGCCGGCTGGCGAATCTTGAAACGCTTCGAGCTGGAGGCAATCCGGGCATCCACGGCGAAATTCCAATGCAGATATCAAACTGCAAGGCTCTTGTTTTTCTTGGACTAGCAGATACCGGAGTTTCTGGGGAGATTCCACCAACAATAGGAGAACTCACCAATCTTCAAACACTTTCAGTATACACTGCACATCTCACAGGTCACATTCCACCAGAGATTCAAAACTGTTCATCTTTGGAAAACTTGTTCCTATATGAAAACCAGCTTTCAGGGAACATCCCTGATGAGTTAGGCTCTATGCAAAGCCTTAAGAGAGTGTTGCTTTGGCAGAACAATCTAAGTGGTACAATTCCAGAGAGTCTTGGAAACTTGACTAATCTGAAGGTGATAGATTTCTCTTTGAATTCTCTGGCTGGTGAATTACCTTTTAGTCTCAGTAATCTACTCTCATTAGAGGAGCTTCTTTTGTCTGATAACAACATTACTGGAGAAATTCCTTCCTATATTGGAAACTTTTCGAGGCTGAAGCAACTCGAATTGGATAACAACAAGTTCTCTGGAGAGATTCCAACTGTCTTGGGGAATCTCAAGGAGCTTACTCTCTTCTTTGCCTGGCAGAATCAGCTCCATGGAAGCATACCAGCTGAACTCTCTGACTGCAAGAAGCTTGAAGCAATTGATCTTTCGCATAACTTCCTCACCGGTTCGATTCCTCGAACACTGTTTCATCTAGAGAATTTAACTCAGTTGTTGTTGATATCAAACATGCTTTCAGGACAAATTCCACCAGATATTGGCAGCTGCACTAGGCTGAGCAGGTTGCGCTTGGGATCGAACAATTTCACCGGTCATATTCCACCAGAAATAGGCCTTTTAAACCGGCTGAGCTTCCTCGAGTTATCAGATAATATGCTCAGTGGAGATATTCCCACTGAGATTGGTAACTGTGCTAATCTAGAGATGCTTGATCTGCACGGCAATGCCCTGCAAGGAACAGTTCCTTCCTCATTAGAATTCCTAGTTTCTTTGAATGTCTTGGATCTTTCTGCAAATCAAATAAGTGGAAGCATTCCTGGAAACTTGGGAAAACTTTCATCTCTAAACAAGTTGATTCTAAGTGGAAACCATATCAGTGGTTTGATTCCTCTGTCACTAGGCCTCTGCATGAATCTGCAGTTGCTGGATATAAGTAACAACATGATCATTGGTTCGATTCCCGATGAGATTGGCCACTTGCAAGGCCTAGATATCCTCTTGAACTTGAGTTGGAATTCTCTAACAGGCACCATTCCAGAGACCTTTTCGAATCTTTCGAAACTTTCCATATTAGACCTCTCTCACAACAAGCTCTCAGGCACCCTCCGTGTGCTAAGCAGTCTTGAAAATCTTGTCTCTCTAAATGTCTCCTACAACAGATTTTCTGGTTCTCTCCCTGATACCAAGTTCTTCCGCGATCTCCCTCCGGCTGCATTCGCTGGCAACCCTGAGCTTTGCCTTAACAAGTGTCGTCCGGAGGGAGATCGCCAAGAAGCAAAGTCAGTAAGAAACATCCTTATCTACACTTTCCTTGGTGTTATTTTAACATCTATTGTTGTAACCTTGGGAGTAATCTTAGCACTCAGAATTCAAGGGGCTACTTTTGGGACAAAATTTGAGGAAGGTGGTGAGCTTGAATGGGCTTTCACTCCATTCCAAAAGCTCAACTTCTCAATCAATGACATTGTCACAAAGCTAACAGATTCAAACATCGTGGGAAAAGGTTGCTCAGGGATCGTTTATCGAGTAGAGACTCCAATGAAACAGTTAATTGCAGTTAAGAAGTTGTGGCCAATAAAAAGCGACGAGCCGCCACCAGAGAGAGACCAGTTTTCTGCTGAAGTTCAGGCCCTTGGATCAATAAGGCACAAGAACATTGTAAGACTCTTAGGATGCTGTGACAACGGACGAACTCGGCTGCTCTTGTTTGATTACATATGCAATGGGAGCTTGTTTGGATTGCTCCATGAGAAGAGATTGTTCTTGGATTGGGATGCAAGGTACAAGATCATGCTTGGAGCAGCTCATGGTTTGGAATATCTTCATCATGATTGTATCCCTCCAATTGTTCATAGGGATATCAAGGCCAATAACATCTTAGTTGGTCCACAATTTGAAGCTTTTCTTGCAGATTTTGGCCTTGCCAAACTTGTCAATTCATCAGATTGTTCTGCAGCCTCTAACATTGTTGCAGGCTCTTATGGATACATAGCTCCTGAATATGGATACAGTTTGAGGATCACAGAGAAAAGTGATGTGTATAGTTTCGGAGTGGTGCTACTCGAGGTGTTAACAGGGATGGAGCCAACAGATAACAGGATTCCAGAGGGTGCACATATTGTCACCTGGGTTAGCTATGAAATCAGAGTGAAGAAAAGAGACTTCACATCAATCCTTGACCAGAATCTGATACTGCAATGTGGAACAAGGATCCCTGAGATGCTTCAAGTTCTTGGAGTGGCTCTCCTATGTGTGAATCCTTGCCCAGAAGAAAGGCCTGCCATGAAAGATGTAACAGCAATGCTTAAGGAGATCAGACATGAAAATGATGAATTCGAGAAGCCCAATTTCCTCCATAAAGGCATGGTTACAAATCCTAAAGCGGCTGTTCATTGTTCAAGTTTCTCTAGATCATGTCAGCCACTAATAGATTCACCATCTTCTTCTTCATAG 3288 0.4261 MSRNASSTTLLILFLLNISLLLPPQISSLNQEGLSLLSWISTFNSSNSATASSFFSSWDPTHENPCRWDYIKCSKQGFVSEIIVQSIDLHSTFPTQLVSFNHLETLVISNGNLTGEIPTSLGNLTSLVTLDLSFNTLSGTIPDEIGQLYNLQWLSLNSNALNGEIPTTIGNLTKLQQLALYDNQLSGMIPGEIGRLANLETLRAGGNPGIHGEIPMQISNCKALVFLGLADTGVSGEIPPTIGELTNLQTLSVYTAHLTGHIPPEIQNCSSLENLFLYENQLSGNIPDELGSMQSLKRVLLWQNNLSGTIPESLGNLTNLKVIDFSLNSLAGELPFSLSNLLSLEELLLSDNNITGEIPSYIGNFSRLKQLELDNNKFSGEIPTVLGNLKELTLFFAWQNQLHGSIPAELSDCKKLEAIDLSHNFLTGSIPRTLFHLENLTQLLLISNMLSGQIPPDIGSCTRLSRLRLGSNNFTGHIPPEIGLLNRLSFLELSDNMLSGDIPTEIGNCANLEMLDLHGNALQGTVPSSLEFLVSLNVLDLSANQISGSIPGNLGKLSSLNKLILSGNHISGLIPLSLGLCMNLQLLDISNNMIIGSIPDEIGHLQGLDILLNLSWNSLTGTIPETFSNLSKLSILDLSHNKLSGTLRVLSSLENLVSLNVSYNRFSGSLPDTKFFRDLPPAAFAGNPELCLNKCRPEGDRQEAKSVRNILIYTFLGVILTSIVVTLGVILALRIQGATFGTKFEEGGELEWAFTPFQKLNFSINDIVTKLTDSNIVGKGCSGIVYRVETPMKQLIAVKKLWPIKSDEPPPERDQFSAEVQALGSIRHKNIVRLLGCCDNGRTRLLLFDYICNGSLFGLLHEKRLFLDWDARYKIMLGAAHGLEYLHHDCIPPIVHRDIKANNILVGPQFEAFLADFGLAKLVNSSDCSAASNIVAGSYGYIAPEYGYSLRITEKSDVYSFGVVLLEVLTGMEPTDNRIPEGAHIVTWVSYEIRVKKRDFTSILDQNLILQCGTRIPEMLQVLGVALLCVNPCPEERPAMKDVTAMLKEIRHENDEFEKPNFLHKGMVTNPKAAVHCSSFSRSCQPLIDSPSSSS 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00481 1095 Gene3D Ribonuclease Inhibitor 399 699 IPR032675 -
Adu08g00481 1095 SMART LRR_typ_2 124 148 IPR003591 -
Adu08g00481 1095 SMART LRR_typ_2 653 686 IPR003591 -
Adu08g00481 1095 SMART LRR_typ_2 557 580 IPR003591 -
Adu08g00481 1095 SMART LRR_typ_2 437 461 IPR003591 -
Adu08g00481 1095 SMART LRR_typ_2 172 196 IPR003591 -
Adu08g00481 1095 SMART LRR_typ_2 485 509 IPR003591 -
Adu08g00481 1095 SMART LRR_typ_2 293 317 IPR003591 -
Adu08g00481 1095 SMART LRR_typ_2 341 365 IPR003591 -
Adu08g00481 1095 SMART LRR_typ_2 630 652 IPR003591 -
Adu08g00481 1095 SMART LRR_typ_2 605 629 IPR003591 -
Adu08g00481 1095 SMART LRR_typ_2 533 556 IPR003591 -
Adu08g00481 1095 Pfam Leucine rich repeat N-terminal domain 30 74 IPR013210 -
Adu08g00481 1095 PANTHER LRR RECEPTOR-LIKE KINASE 9 1068 - -
Adu08g00481 1095 Gene3D Transferase(Phosphotransferase) domain 1 851 1068 - -
Adu08g00481 1095 SMART LRR_sd22_2 485 511 - -
Adu08g00481 1095 SMART LRR_sd22_2 341 367 - -
Adu08g00481 1095 SMART LRR_sd22_2 124 147 - -
Adu08g00481 1095 SMART LRR_sd22_2 533 562 - -
Adu08g00481 1095 SMART LRR_sd22_2 148 174 - -
Adu08g00481 1095 SMART LRR_sd22_2 413 442 - -
Adu08g00481 1095 SMART LRR_sd22_2 630 655 - -
Adu08g00481 1095 ProSiteProfiles Protein kinase domain profile. 771 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00481 1095 ProSiteProfiles Leucine-rich repeat profile. 535 558 IPR001611 GO:0005515
Adu08g00481 1095 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 1068 - -
Adu08g00481 1095 SMART serkin_6 771 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00481 1095 PRINTS Leucine-rich repeat signature 127 140 - -
Adu08g00481 1095 PRINTS Leucine-rich repeat signature 630 643 - -
Adu08g00481 1095 SUPERFAMILY RNI-like 87 403 - -
Adu08g00481 1095 Gene3D Phosphorylase Kinase; domain 1 752 850 - -
Adu08g00481 1095 Gene3D Ribonuclease Inhibitor 28 191 IPR032675 -
Adu08g00481 1095 ProSitePatterns Protein kinases ATP-binding region signature. 777 805 IPR017441 GO:0005524
Adu08g00481 1095 SUPERFAMILY Protein kinase-like (PK-like) 761 1047 IPR011009 -
Adu08g00481 1095 Pfam Protein kinase domain 773 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00481 1095 ProSitePatterns Serine/Threonine protein kinases active-site signature. 894 906 IPR008271 GO:0004672|GO:0006468
Adu08g00481 1095 Gene3D Ribonuclease Inhibitor 192 395 IPR032675 -
Adu08g00481 1095 Pfam Leucine Rich Repeat 583 605 IPR001611 GO:0005515
Adu08g00481 1095 Pfam Leucine Rich Repeat 415 437 IPR001611 GO:0005515
Adu08g00481 1095 SUPERFAMILY RNI-like 335 671 - -
Adu08g00481 1095 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Adu08g00481 1095 Pfam Leucine rich repeat 512 570 IPR001611 GO:0005515
Adu08g00481 1095 Pfam Leucine rich repeat 612 666 IPR001611 GO:0005515
Adu08g00481 1095 ProSiteProfiles Leucine-rich repeat profile. 632 654 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00481 Adu-Chr8 8669664 8673292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00481 28 1078 Receptor kinase-like Gene Family AT5G56040 48.048 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu08g00481 Pkinase 6.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00481 - - gmx:100780101 1726.84