Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00471 ATGAACAGCTACTGCTACGACAACAACGACGTCGTTATGGAACAAAGCAATAGCATCCTATGCAAATACACAGTTCACCGCACTGTCACTAACAAGTTCACCAAACACAACAAGAAATCCACCATAGAACCCAGAACGGTGCGTGTGTCTTACACCGATCCAGACGCCACTGACTCCTCCGCCGATGAAGCAGAACAACACTTCCTCTCTTCTTCTCGCAAGAGAGTAAAGCGTTACATCAACAGCATTCAAATCGAACCCGCTTCCACCAAGAACGCTGTCTCCGCCGCACACAATAAGAAAAGGGCTACTGCAAACGCTGGCGACGCTGCTGCTTCTTGCCGCCGGCCGGCCAAGGCTCCGGTGACCACTAACGGAGGGAGGAAGTTCCGCGGTGTAAGGCAAAGACCATGGGGGAAGTGGGCGGCGGAGATTAGAGATCCGGCGAGAAGAGTTCGTCTCTGGCTGGGAACCTACGACACGGCGGAAGAAGCTGCCATGGTTTATGACAATGCGGCCATTCAAATTCGTGGCCCTGACGCTCTCACAAACTTCATCACTCCACCGCAGCGCGGAGAACCACAGCCACAGCCAGAACCACAAGAAGAAGAAGAAGCAGAAACAACCACCGCGGTGAAACCAGAAATGAAGGTGGTTGTAACTGCAGAGGCTTCCGGCTCCGGGTCCGGCTACGACTCCGGTTCAGAAGATCACCGGTGTCTGAACCTCTCATCCCCAACCTCAGTTCTCCAATTCAGAAGCAGCGAAACGGAATCGTCAGAGCAAGCAAAGAAACAGTCGTTCCTCCATTGTAGTAGTGATGACGTGTCAGGTTCAGGTTCAGTTTCAATGGAAGAAGTATTCGGAGAGTGCCAAGGCGAAACGAGCTTGTTCGAGGAGACTGGTGAGTTCTTGGGTTTGGAAATGATGCCGGTTTGGGATGAGGTGTTCGATTTCCAAACGCCGCAGTACCCAGTGATGTTCGAGGAGGAAGAAGAGAAAGGGTTATTTGGGGAAACAAAGACGACGTCGTTTTGGTGCGCAGAAGAGGATCAAGAATTAAGCATGGAGAACTATAACAGTAGCATTGTTCTGGCTGATTCACTCATCGATTTCGAGAAGGCTTGTAATCCAACTCCAACTCCATCATCTAGCTTTTGCCAAATGGACGATGATTACTTCCAAGATATTTTGTTGGCTTCTGATCCTCTCGTCCTTCTATAA 1224 0.5041 MNSYCYDNNDVVMEQSNSILCKYTVHRTVTNKFTKHNKKSTIEPRTVRVSYTDPDATDSSADEAEQHFLSSSRKRVKRYINSIQIEPASTKNAVSAAHNKKRATANAGDAAASCRRPAKAPVTTNGGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQIRGPDALTNFITPPQRGEPQPQPEPQEEEEAETTTAVKPEMKVVVTAEASGSGSGYDSGSEDHRCLNLSSPTSVLQFRSSETESSEQAKKQSFLHCSSDDVSGSGSVSMEEVFGECQGETSLFEETGEFLGLEMMPVWDEVFDFQTPQYPVMFEEEEEKGLFGETKTTSFWCAEEDQELSMENYNSSIVLADSLIDFEKACNPTPTPSSSFCQMDDDYFQDILLASDPLVLL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00471 407 MobiDBLite consensus disorder prediction 104 131 - -
Adu08g00471 407 CDD AP2 129 185 IPR001471 GO:0003700|GO:0006355
Adu08g00471 407 SMART rav1_2 129 192 IPR001471 GO:0003700|GO:0006355
Adu08g00471 407 Pfam AP2 domain 129 178 IPR001471 GO:0003700|GO:0006355
Adu08g00471 407 ProSiteProfiles AP2/ERF domain profile. 129 186 IPR001471 GO:0003700|GO:0006355
Adu08g00471 407 SUPERFAMILY DNA-binding domain 129 185 IPR016177 GO:0003677
Adu08g00471 407 Gene3D AP2/ERF domain 128 187 IPR036955 GO:0003700|GO:0006355
Adu08g00471 407 MobiDBLite consensus disorder prediction 182 213 - -
Adu08g00471 407 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-LIKE 19 400 - -
Adu08g00471 407 PRINTS Ethylene responsive element binding protein signature 130 141 IPR001471 GO:0003700|GO:0006355
Adu08g00471 407 PRINTS Ethylene responsive element binding protein signature 152 168 IPR001471 GO:0003700|GO:0006355
Adu08g00471 407 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 19 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00471 Adu-Chr8 8566085 8568237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00471 21 300 AP2-EREBP Transcription Factor Family AT4G27950 41.639 1.61e-59 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu08g00471 AP2 2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00471 - - adu:107460630 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00471 08 8566085 8568237 Adu08g00471 08 8566085 8568237 ECH