LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu08g00450	ATGATGGATGAACAGAATGAATTCGAACAAGATTTCGGAGATGAATTTACTGAGGGAGCGTATTTTTCTGAATCTGGTCAGTCAGAAGATATCCTTGAAGCTGCTTTTACGGTTGACTCCGTGCAAGATATTACAACTTTGAATTTCACTGAAAATTGTGCAGAGAAAATTGGTAAATATCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATCTGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGTAAGACCTTCAAGAATAGTATTGGCGAGATTTACAAACAAAAGTTTGTATGTCATAGGCAAGGATTCAGGGAGGAGAAATATTACACGATGGAAAAAAGGAAGAATGAGCCTAGATTGGAAACAAGAACTGGGTGTGAAGCACGAATGTATGTTAAATTTGTACCAGAAACTGGAAGATGGCACCTCTTTTATTTCTCTAACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGAAAAATATCAGAGACAGATATTATGCAAATGATGAACATGCTAAAGTCCGGGATTAGCACCTCACAGATATTTGGTCTTCTAGTTAGTCAAGTAGACGGGTATGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTCATGATTCAAAAGGTGTAGCTAAAAGTAGCAATCCGTACGTGCATCAAACCACTGGAGGCTCAGGACAATCATCTAAGAAGAAGCGGCAACGTTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATGTCCTTGGCAAAGGGACATTGACAACAATGTTATAGAAGATGAAGCTAATGATTCGGATGATGGCGACATGTATACCGAAGCGACGGCTGAGTTAGATAGTGATAATTAG	1002	0.3962	MMDEQNEFEQDFGDEFTEGAYFSESGQSEDILEAAFTVDSVQDITTLNFTENCAEKIGKYHFSTLQLAFDFYLKYSKSKGFSARKSKTFKNSIGEIYKQKFVCHRQGFREEKYYTMEKRKNEPRLETRTGCEARMYVKFVPETGRWHLFYFSNEHNHDLLDTQFSAMLPAHRKISETDIMQMMNMLKSGISTSQIFGLLVSQVDGYEFVGYGPRDMYNEIARQRRQIPGDAARVLKKLEDMRLKDPQLYFKACHDSKGVAKSSNPYVHQTTGGSGQSSKKKRQRCSVCQMEGHKKTTCPWQRDIDNNVIEDEANDSDDGDMYTEATAELDSDN	333

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu08g00450	333	MobiDBLite	consensus disorder prediction	262	283	-	-
	Adu08g00450	333	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	21	237	-	-
	Adu08g00450	333	MobiDBLite	consensus disorder prediction	310	333	-	-
	Adu08g00450	333	Pfam	FAR1 DNA-binding domain	70	160	IPR004330	-
	Adu08g00450	333	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN	21	237	-	-
	Adu08g00450	333	MobiDBLite	consensus disorder prediction	258	333	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu08g00450	Adu-Chr8	8079716	8081977	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Adu08g00450		FAR1	1.2e-21	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu08g00450	-		-	aip:107607175	476.478