Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00427 ATGGAGTACGGGAGGCTTGGTCCTACTGACTTATCTCGTGCCGATGAAACTCCGGTTAATAGGCCGAGATCCTCTACAACTGCCAACACCAAAATTATACTCTTCTCGCTTCTTGCAATTGTTCTCATTGTCGCTTCTGCCATCTCCGCCGTACTTGTTACCGTCGTCCGATCTCGCGCTTCCACCGACGACGGACGATTAAAGGAACCTACTCTCGCGGGCAAACCGACGCAGGCCATCTCACGCACCTGCAGCAGGACAAGGTTCCCGGACCTCTGCGTTAACTCGCTTCTCGATTTTCCGGGATCCACGGCGGCGACGGAGCGGGACTTAGTCCACATTTCCTTCAACATGACGCTGCAGCACTTTACTAAAGCGCTCTACATCTCCGCTGCGATTTCTTCCTCCGGTGTGTACGCCTCCATGGATCCACGCTCCCGTGCCGCATACGACGACTGCCTTGAGCTTCTCGACGAGTCCGTGGACGCCATAGCAAGATCTCTCACTACAGTCTCTCCCTCCGGCGCATCTCCCGGCGGCACTGTACGACCGCTTGGATCGTCCTCGGACGACGTGCTCACGTGGCTGAGCGCCGCGCTTACAAACCAGGAGACGTGTGCCGAGGGGATGGAAGGCGCCTCCGGCGCCGTGAAGAGCCAGATGGCGAACAACCTGAAGGACTTGTCGGAGCTGGTGAGTAACTGTTTGGCGATATTCTCGGCTTCCGGTGCCGGCGACGACTTCTCCGGTGTCCCCATACAGAACCGGCGAAGGTTGATGGCAATGCGAAAGGAAGAGGTGGAGGAGAAGGAGGATTTCCCTAAGTGGCTGAGTAAAAGAGATAGGAGGTTGTTGAGTTTACCGGTTTCGGCCGTACAGGCGGATGTCATCGTCTCAAAGGACGGTAACGGCTCCGTCAAGACCATCGCCGAAGCCATTAAGAAGGTTCCGGAGTACGGTAACCGGCGATTTGTTATTTACATAAAGGCAGGAAGGTACGAAGAGGACAATTTAAAGGTGGGACGGAAGAAAACAAACGTCATGATCATCGGGGACGGCAAGGGCAAGACGGTCATCACGGGCGGTAGAAACGTTTTGCAGGAAATGACCACATTTCATACTGCATCCTTTGCTGCGAGTGGCTCTGGATTCATCGCAAGAGACATGACATTCGAGAACTACGCGGGCCCAGCGAAGCACCAAGCGGTGGCTCTCCGCCTCAGTTCAGACCACGCGGTGGTTTACCGGTGCAACGTCATAGGCTACCAAGACACATGCTACGTTCACTCAAACCGTCAATTCTTCAGAGAATGCGACATATACGGTACCGTAGACTTCATATTCGGCAACGCCGCAGTGGTATTCCAGAACTGCAGCCTCTACGCTCGAAAGCCCATGCCCCAACAAAAAAACACAATAACGGCCCAAAACAGAAAAGACCCGAATCAGAACACAGGCATTTCGATCCATAACTGTCGGATCCTAGCCACGTCAGATCTCGAGGCATCAAAGGGTAGCTTCCCAACTTATCTGGGCCGTCCATGGAAAATGTACGCTAGGACCGTATACATGATATCATACATCGGTGATCACGTGCATCCACGTGGATGGTTAGAGTGGAACACAAGCAATTTTGCACTGGACACGTGTTACTACGGTGAGTACATGAATTTTGGGCCGGGTGCTGCCATCGGTCAACGGGTTAAATGGGCTGGGTATCGGATCATCACGTCCACCGTGGAAGCAAGCAGATTCACGGTGGGCCAATTCATTTCAGGCTCCTCGTGGTTGCCGTCCACCGGAGTGGCTTTTATTTCTGGCCTATCAACCTGA 1833 0.5374 MEYGRLGPTDLSRADETPVNRPRSSTTANTKIILFSLLAIVLIVASAISAVLVTVVRSRASTDDGRLKEPTLAGKPTQAISRTCSRTRFPDLCVNSLLDFPGSTAATERDLVHISFNMTLQHFTKALYISAAISSSGVYASMDPRSRAAYDDCLELLDESVDAIARSLTTVSPSGASPGGTVRPLGSSSDDVLTWLSAALTNQETCAEGMEGASGAVKSQMANNLKDLSELVSNCLAIFSASGAGDDFSGVPIQNRRRLMAMRKEEVEEKEDFPKWLSKRDRRLLSLPVSAVQADVIVSKDGNGSVKTIAEAIKKVPEYGNRRFVIYIKAGRYEEDNLKVGRKKTNVMIIGDGKGKTVITGGRNVLQEMTTFHTASFAASGSGFIARDMTFENYAGPAKHQAVALRLSSDHAVVYRCNVIGYQDTCYVHSNRQFFRECDIYGTVDFIFGNAAVVFQNCSLYARKPMPQQKNTITAQNRKDPNQNTGISIHNCRILATSDLEASKGSFPTYLGRPWKMYARTVYMISYIGDHVHPRGWLEWNTSNFALDTCYYGEYMNFGPGAAIGQRVKWAGYRIITSTVEASRFTVGQFISGSSWLPSTGVAFISGLST 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00427 610 Pfam Pectinesterase 295 593 IPR000070 GO:0030599|GO:0042545
Adu08g00427 610 ProSitePatterns Pectinesterase signature 2. 440 449 IPR033131 -
Adu08g00427 610 Gene3D - 289 608 IPR012334 -
Adu08g00427 610 TIGRFAM PME_inhib: pectinesterase inhibitor domain 67 239 IPR006501 GO:0004857
Adu08g00427 610 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 241 IPR035513 -
Adu08g00427 610 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 240 IPR035513 -
Adu08g00427 610 MobiDBLite consensus disorder prediction 1 24 - -
Adu08g00427 610 CDD PMEI-like_3 84 241 - -
Adu08g00427 610 SUPERFAMILY Pectin lyase-like 290 607 IPR011050 -
Adu08g00427 610 Pfam Plant invertase/pectin methylesterase inhibitor 79 238 IPR006501 GO:0004857
Adu08g00427 610 PANTHER PECTINESTERASE 22 608 - -
Adu08g00427 610 PANTHER PECTINESTERASE 22 608 - -
Adu08g00427 610 SMART PMEI_2 75 238 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00427 Adu-Chr8 7518653 7523304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00427 1 609 Carbohydrate Esterase AT5G53370 62.866 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00427 - - gmx:100808236 897.501