Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00411 ATGGAGTTCTTTAATAACGAACTCGATTCTTTCTCTAACGACATCGACAAAATAATGGGGATTTCACCTATGGATGATTTCGACGATTGGGCGCCATTGTTAACCTACAAAAGCACGCAGAAGCTTTTCTTGACCGACTTGCCAGAAGTGGATAACGACTTCGACGACCTTCCACCTCTGGACGATTTCAAGAAAGAGAGCGAGGAAGAGGATCAAGAACACAAGCAGTTACTACAACTTGTTCCGAGTAGTAGTACGATTAAGAACAAGAAGAGTGAGTTGGAATACGATGAGATTAAGAAACACTTCCATTTGCCAATCACAGAAGCTGCTAGTAAGATGAACATTGGTTTGACATTGTTGAAGAGAAGGTGCAGAGAACTCAGCATCAAGCGTTGGCCTCATAGGAAAATCAAGAGCTTGCATTTACTCATACAAACTCTCAAGGAGACAGGTTTGGACAATGAAGTTGAAATGTTGGAGGAAGAAATAAACATGTTGAAGCAAGTTCCAGAGACGGAAATCACACAAGAGACCAAGAAACTAAGGCAGGCTTATTTTAAAGCCAATTACAAAAGGAGGAAACTTTTGGCCTCTAACTCTTCTTGA 609 0.4105 MEFFNNELDSFSNDIDKIMGISPMDDFDDWAPLLTYKSTQKLFLTDLPEVDNDFDDLPPLDDFKKESEEEDQEHKQLLQLVPSSSTIKNKKSELEYDEIKKHFHLPITEAASKMNIGLTLLKRRCRELSIKRWPHRKIKSLHLLIQTLKETGLDNEVEMLEEEINMLKQVPETEITQETKKLRQAYFKANYKRRKLLASNSS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00411 202 Coils Coil 60 80 - -
Adu08g00411 202 PANTHER PROTEIN RKD4 64 201 IPR044607 GO:0003700
Adu08g00411 202 PANTHER PROTEIN RKD1-RELATED 64 201 - -
Adu08g00411 202 Pfam RWP-RK domain 94 141 IPR003035 -
Adu08g00411 202 Coils Coil 150 170 - -
Adu08g00411 202 ProSiteProfiles RWP-RK domain profile. 83 163 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00411 Adu-Chr8 7316416 7317186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00411 91 198 AtRKD Transcription Factor Family AT5G53040 56.481 1.69e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Adu08g00411 RWP-RK 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00411 - - aip:107605887 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00411 08 7316416 7317186 Adu08g00411 08 7316416 7317186 ECH